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sw_5_scaffold_824

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_824_1
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..226
DNA (225bp) protein (75aa)
Trk potassium uptake system protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DZV6_9EURY
Trk potassium uptake system protein {ECO:0000313|EMBL:ELZ41021.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
potassium transporter Trk
sw_5_scaffold_824_2
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(315..494)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YZX5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY79815.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_5_scaffold_824_3
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(511..627)
DNA (117bp) protein (39aa)
Potassium transport system protein trkH1 n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G8J8_9EURY
Potassium transport system protein trkH1 {ECO:0000313|EMBL:ELZ68586.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax praho
sw_5_scaffold_824_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(667..1665)
DNA (999bp) protein (333aa)
Cation transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DCH9_9EURY
Cation transporter {ECO:0000313|EMBL:ELZ32452.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
trkH1; potassium transport system protein trkH1
sw_5_scaffold_824_5
unknown

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1986..2195
DNA (210bp) protein (70aa)

This feature has no annotations

sw_5_scaffold_824_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2332..2487
DNA (156bp) protein (52aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=I7KXQ8_NATPD
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCI69583.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
small CPxCG-related zinc finger protein
sw_5_scaffold_824_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2494..3165
DNA (672bp) protein (224aa)
DNA binding domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7H4_HALJB
DNA binding domain-containing protein
DNA binding domain-containing protein {ECO:0000313|EMBL:ADJ14069.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkali
sw_5_scaffold_824_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3220..3942)
DNA (723bp) protein (241aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44780.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator
sw_5_scaffold_824_9
unknown

Not on your lists

comp(3944..4039)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_5_scaffold_824_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4119..4793)
DNA (675bp) protein (225aa)
DNA binding domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC97_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EMA55466.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
DNA binding domain-containing protein
sw_5_scaffold_824_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5006..5299
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0N4Q9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52922.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_824_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5316..6212
DNA (897bp) protein (299aa)
Formate/nitrite transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNN3_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:EMA46973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
formate/nitrite transporter
sw_5_scaffold_824_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6561..6917
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM31_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45794.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_5_scaffold_824_14
unknown

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comp(6994..7149)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_5_scaffold_824_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7424..7579
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M258_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39786.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
small CPxCG-related zinc finger protein
sw_5_scaffold_824_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7583..8488
DNA (906bp) protein (302aa)
DNA binding domain-containing protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGW1_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EJN60474.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
DNA binding domain-containing protein
sw_5_scaffold_824_17
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8648..8914)
DNA (267bp) protein (89aa)
Transposase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HTB6_9EURY
Transposase {ECO:0000313|EMBL:ELZ86932.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;"
IS240-type transposase (ISH103)
Displaying 17 items

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