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sw_5_scaffold_865

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_865_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..594
DNA (594bp) protein (198aa)
Putative helicase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L984_9EURY
Putative helicase {ECO:0000313|EMBL:EMA30167.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
cas3; CRISPR-associated helicase Cas3
sw_5_scaffold_865_2
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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690..1241
DNA (552bp) protein (184aa)
CRISPR-associated exonuclease Cas4; EC=3.1.12.1 {ECO:0000250|UniProtKB:Q97TX9};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofer
CRISPR-associated protein Cas4 n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQN9_HALVD
cas4; CRISPR-associated protein Cas4
sw_5_scaffold_865_3
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1243..2004
DNA (762bp) protein (254aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
CRISPR-associated endonuclease Cas1 n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JJK3_9EURY
cas1; CRISPR-associated protein Cas1
sw_5_scaffold_865_4
unknown

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comp(1931..2158)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_5_scaffold_865_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2183..2446
DNA (264bp) protein (88aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JKD6_9EURY
cas2; CRISPR-associated protein Cas2
sw_5_scaffold_865_6
unknown

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3590..3781
DNA (192bp) protein (64aa)

This feature has no annotations

sw_5_scaffold_865_7
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3922..4782)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJ64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ADE02139.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_5_scaffold_865_8
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5056..5907)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJ65_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE02139.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_5_scaffold_865_9
unknown

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comp(6108..6953)
DNA (846bp) protein (282aa)

This feature has no annotations

sw_5_scaffold_865_10
unknown

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comp(7170..7466)
DNA (297bp) protein (99aa)

This feature has no annotations

sw_5_scaffold_865_11
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8111..8716
DNA (606bp) protein (202aa)
hypothetical protein id=24643725 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Uncharacterized protein {ECO:0000313|EMBL:ERH13449.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_5_scaffold_865_12
unknown

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8747..8860
DNA (114bp) protein (38aa)

This feature has no annotations

sw_5_scaffold_865_13
unknown

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9774..9872
DNA (99bp) protein (33aa)

This feature has no annotations

sw_5_scaffold_865_14
unknown

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comp(10218..10391)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_5_scaffold_865_15
unknown

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10519..10665
DNA (147bp) protein (49aa)

This feature has no annotations

sw_5_scaffold_865_16
unknown

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comp(10594..10836)
DNA (243bp) protein (81aa)

This feature has no annotations

sw_5_scaffold_865_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11015..12286
DNA (1272bp) protein (424aa)
Amino acid-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZX0_9EURY
Amino acid-binding protein {ECO:0000313|EMBL:ELZ28760.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidu
livK-2; branched-chain amino acid ABC transporter amino acid-binding protein
sw_5_scaffold_865_18
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12240..13325
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP39_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELZ88707.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofe
livH9; branched-chain amino acid ABC transporter permease
sw_5_scaffold_865_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13738..14970
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SHP3_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELZ28758.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
inner-membrane translocator
sw_5_scaffold_865_20
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14967..15809
DNA (843bp) protein (281aa)
ABC transporter n=2 Tax=Haloferax RepID=M0HVR7_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ88705.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-897.;"
livG-10; branched-chain amino acid ABC transporter ATP-binding protein
sw_5_scaffold_865_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16162..16968
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TYR2_9EURY
ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:ELZ28756.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; H
livF1; putative branched-chain amino acids ABC transporter ATP-binding protein
sw_5_scaffold_865_22
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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17197..17490
DNA (294bp) protein (98aa)
hypothetical protein id=24620352 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ERH02973.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
sw_5_scaffold_865_23

Not on your lists

17492..17725
DNA (234bp) protein (78aa)
hypothetical protein id=24620353 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
Mut7-C RNAse domain protein {ECO:0000313|EMBL:ESS08423.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
sw_5_scaffold_865_24
unknown

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comp(17876..18187)
DNA (312bp) protein (104aa)

This feature has no annotations

sw_5_scaffold_865_25
unknown

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comp(18229..18390)
DNA (162bp) protein (54aa)

This feature has no annotations

sw_5_scaffold_865_26
unknown

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18968..19627
DNA (660bp) protein (220aa)

This feature has no annotations

sw_5_scaffold_865_27
unknown

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20110..20442
DNA (333bp) protein (111aa)

This feature has no annotations

Displaying 27 items

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