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sw_5_scaffold_871

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_871_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..347)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX96_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90899.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_871_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(344..1048)
DNA (705bp) protein (235aa)
Type II secretion system protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWC4_HALMD
transmembrane protein (type II secretion system proteins TadC)
Type II/IV secretion system transmembrane protein {ECO:0000313|EMBL:CAI48170.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
sw_5_scaffold_871_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(991..1911)
DNA (921bp) protein (307aa)
Flagella assembly protein j n=1 Tax=Halogranum salarium B-1 RepID=J3JH94_9EURY
Flagella assembly protein j {ECO:0000313|EMBL:EJN60794.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
transmembrane protein (type II secretion system proteins TadC)
sw_5_scaffold_871_4
unknown

Not on your lists

2421..2627
DNA (207bp) protein (69aa)

This feature has no annotations

sw_5_scaffold_871_5

Not on your lists

comp(2821..3378)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4X7X7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS03809.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_5_scaffold_871_6
unknown

Not on your lists

3690..4271
DNA (582bp) protein (194aa)

This feature has no annotations

sw_5_scaffold_871_7
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4268..4444
DNA (177bp) protein (59aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P7S2_9EURY
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:EMA65589.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii
fumarylacetoacetate (FAA) hydrolase
sw_5_scaffold_871_8
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4740..5015
DNA (276bp) protein (92aa)
NTP pyrophosphohydrolase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KE75_HALAR
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EMA19652.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis D
sw_5_scaffold_871_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5143..6000
DNA (858bp) protein (286aa)
phytanoyl-CoA dioxygenase n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626F07
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EYF01004.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondr
phytanoyl-CoA dioxygenase
sw_5_scaffold_871_10
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6083..6430)
DNA (348bp) protein (116aa)
Cupin n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NNE4_9EURY
Cupin {ECO:0000313|EMBL:EMA59321.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
Cupin 2 barrel domain-containing protein
sw_5_scaffold_871_11
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7039..7209)
DNA (171bp) protein (57aa)
Transposase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LRJ1_9EURY
Transposase and inactivated derivatives-like protein
Transposase {ECO:0000313|EMBL:EMA36096.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
sw_5_scaffold_871_12
unknown

Not on your lists

comp(7287..7391)
DNA (105bp) protein (35aa)

This feature has no annotations

sw_5_scaffold_871_13
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7497..8984
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000303F8B6
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
tolB; translocation protein TolB
sw_5_scaffold_871_14
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9312..9536
DNA (225bp) protein (75aa)
Transposase ISH9 n=3 Tax=Halobacterium salinarum RepID=B0R8M5_HALS3
hypothetical protein
ISH9-type transposase ISH9 {ECO:0000313|EMBL:CAP15054.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinaru
sw_5_scaffold_871_15
unknown

Not on your lists

10076..10453
DNA (378bp) protein (126aa)

This feature has no annotations

sw_5_scaffold_871_16
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10544..11302)
DNA (759bp) protein (253aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YV03_9EURY
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:GAD52840.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarc
sw_5_scaffold_871_17
unknown

Not on your lists

comp(11430..11879)
DNA (450bp) protein (150aa)

This feature has no annotations

sw_5_scaffold_871_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12102..13232)
DNA (1131bp) protein (377aa)
Galactonate dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUH2_9EURY
Galactonate dehydratase {ECO:0000313|EMBL:ELZ26895.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
galactonate dehydratase
sw_5_scaffold_871_19
unknown

Not on your lists

comp(13328..13834)
DNA (507bp) protein (169aa)

This feature has no annotations

sw_5_scaffold_871_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13886..14725)
DNA (840bp) protein (280aa)
hypothetical protein; K07052 id=24614743 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88789.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_5_scaffold_871_21
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14869..15498
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CKY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23007.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
Displaying 21 items

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