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sw_5_scaffold_948

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_948_1
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..351
DNA (351bp) protein (117aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HDR5_9EURY
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:ELZ81872.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans
sw_5_scaffold_948_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(459..1433)
DNA (975bp) protein (325aa)
Putative HTH-type transcriptional regulatory protein C475_04376 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1V5_9EURY
Putative HTH-type transcriptional regulatory protein C475_04376 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosi
hypothetical protein
sw_5_scaffold_948_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1680..2930
DNA (1251bp) protein (417aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tiaS; tRNAIle2(CAT)--2-agmatinylcytidine synthetase (EC:6.3.4.-)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LW01_9EURY
sw_5_scaffold_948_4
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3327..3962
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C579_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ18436.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_5_scaffold_948_5
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4305..5198
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000366D1A3
Uncharacterized protein {ECO:0000313|EMBL:ELY93789.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
hypothetical protein
sw_5_scaffold_948_trna_1
unknown

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5160..5233
DNA (74bp)
transferRNA
sw_5_scaffold_948_6
unknown

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comp(6209..6565)
DNA (357bp) protein (119aa)

This feature has no annotations

sw_5_scaffold_948_7
unknown

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comp(6771..6977)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_5_scaffold_948_8
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6989..7420
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PFY4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA68976.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_5_scaffold_948_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7767..8279
DNA (513bp) protein (171aa)
hypothetical protein id=24629010 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Lactoylglutathione lyase {ECO:0000313|EMBL:ERG91753.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQ
hypothetical protein
sw_5_scaffold_948_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8297..9595)
DNA (1299bp) protein (433aa)
TRAP-type transport system large permease protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18I67_HALWD
dctM; TRAP-type C4-dicarboxylate transport system,large permease component DctM (YiaN)
TRAP-type transport system large permease protein {ECO:0000313|EMBL:CAJ52310.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Hal
sw_5_scaffold_948_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9599..10078)
DNA (480bp) protein (160aa)
dctQ; TRAP-type C4-dicarboxylate transport system,small permease component id=24629012 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:ERG91755.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
dctQ; TRAP-type C4-dicarboxylate transport system,small permease component
sw_5_scaffold_948_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10094..11191)
DNA (1098bp) protein (366aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MPA5_9EURY
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:ERG91754.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadra
dctP; TRAP-type C4-dicarboxylate transport system,periplasmic component DctP (YiaO)
sw_5_scaffold_948_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11345..12583)
DNA (1239bp) protein (413aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5T5_9EURY
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELZ30840.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
pas domain s-box
sw_5_scaffold_948_14
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12580..13365)
DNA (786bp) protein (262aa)
PAS sensor protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YBQ9_9EURY
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEH38325.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger
Displaying 15 items

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