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sw_5_scaffold_99

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_99_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..718)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXN3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38352.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_99_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(994..1767)
DNA (774bp) protein (258aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NGW7_9EURY
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EMA56354.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
ABC-type multidrug transport system, ATPase component
sw_5_scaffold_99_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2080..2853)
DNA (774bp) protein (258aa)
Transposase n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRH3_HALBP
transposase
Transposase {ECO:0000313|EMBL:ADQ65649.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain ATC
sw_5_scaffold_99_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2874..3335)
DNA (462bp) protein (154aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PHD6_9EURY
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:EMA69333.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
transposase
sw_5_scaffold_99_5
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4381..6354)
DNA (1974bp) protein (658aa)
Kinetochore-Ndc80 complex, subunit Spc25 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1H8_HALTV
Kinetochore-Ndc80 complex, subunit Spc25
Kinetochore-Ndc80 complex, subunit Spc25 {ECO:0000313|EMBL:ADB63225.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
sw_5_scaffold_99_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6402..7025)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3R4_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37166.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_99_7
unknown

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7265..7447
DNA (183bp) protein (61aa)

This feature has no annotations

sw_5_scaffold_99_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7900..8676)
DNA (777bp) protein (259aa)
Transcription regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZV1_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ27947.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
IclR family transcriptional regulator
sw_5_scaffold_99_9
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8730..9860)
DNA (1131bp) protein (377aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVI1_HALBP
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADQ68865.1}; Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY28707.1}; TaxID=469382 species="Archaea; Eur
sw_5_scaffold_99_10
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9914..12247)
DNA (2334bp) protein (778aa)
Alpha-glucosidase n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DCG5_9EURY
Alpha-glucosidase {ECO:0000313|EMBL:ELZ31859.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
alpha-glucosidase
sw_5_scaffold_99_11

Not on your lists

12325..13590
DNA (1266bp) protein (422aa)
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZP64_9ARCH
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily {ECO:0000313|EMBL:ESS04375.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
mandelate racemase/muconate lactonizing protein
sw_5_scaffold_99_12

Not on your lists

13629..14600
DNA (972bp) protein (324aa)
Lactate dehydrogenase related dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XFV0_9ARCH
Lactate dehydrogenase related dehydrogenase {ECO:0000313|EMBL:ESS06999.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
phosphoglycerate dehydrogenase-like oxidoreductase
sw_5_scaffold_99_13
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(14605..15471)
DNA (867bp) protein (289aa)
ABC-type sugar transport system, permease component n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBM5_HALHC
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJF16827.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" sour
ABC-type sugar transport system, permease component
sw_5_scaffold_99_14
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15473..16444)
DNA (972bp) protein (324aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIL0_KOSOT
ABC transporter permease {ECO:0000313|EMBL:KHO60967.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoan
binding-protein-dependent transport systems inner membrane component
sw_5_scaffold_99_15
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16916..17236
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI00036D394A
UxaA family hydrolase {ECO:0000313|EMBL:ESE91429.1}; TaxID=1173948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enter
hydrolase
sw_5_scaffold_99_16
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17238..18404
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI0003683DA1
Uncharacterized protein {ECO:0000313|EMBL:KJS18889.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
altronate dehydratase
sw_5_scaffold_99_17
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18401..19405
DNA (1005bp) protein (335aa)
(R)-2-hydroxyacid dehydrogenase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YGH3_9EURY
(R)-2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:GAD53366.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
(R)-2-hydroxyacid dehydrogenase
sw_5_scaffold_99_18
Thermosipho africanus, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

19479..20771
DNA (1293bp) protein (431aa)
Trehalose/maltose binding protein (Fragment) n=1 Tax=Thermosipho africanus H17ap60334 RepID=K2PJ88_9THEM
Trehalose/maltose binding protein {ECO:0000313|EMBL:EKF50279.1}; Flags: Fragment;; TaxID=1161912 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho
trehalose/maltose binding protein
sw_5_scaffold_99_19

Not on your lists

comp(20924..21826)
DNA (903bp) protein (301aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVZ9_9ARCH
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:ESS04376.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_5_scaffold_99_20
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

22270..23745
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TU69_9EURY
cofA; lactaldehyde dehydrogenase CofA
Lactaldehyde dehydrogenase CofA {ECO:0000313|EMBL:AGN16309.1}; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Met
sw_5_scaffold_99_21
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23833..24918)
DNA (1086bp) protein (362aa)
Xylose dehydrogenase (NAD/NADP) n=3 Tax=Haloferax RepID=M0FPT8_9EURY
Xylose dehydrogenase (NAD/NADP) {ECO:0000313|EMBL:ELZ70888.1}; TaxID=1227462 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-6
xylose dehydrogenase (NAD/NADP)
sw_5_scaffold_99_22
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24988..25476)
DNA (489bp) protein (163aa)
IS240-type transposase (ISH102) n=1 Tax=halophilic archaeon DL31 RepID=G2MN30_9ARCH
transposase
Transposase {ECO:0000313|EMBL:AJF27909.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_5_scaffold_99_23
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25585..26007)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DUI3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK39170.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_5_scaffold_99_24
unknown

Not on your lists

26134..26235
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 24 items

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