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sw_5_scaffold_18_18

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: comp(16340..17251)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 291.0
  • Bit_score: 314
  • Evalue 1.70e-82
tRNA pseudouridine synthase A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFE6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 291.0
  • Bit_score: 314
  • Evalue 9.20e-83
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 296.0
  • Bit_score: 292
  • Evalue 1.10e-76

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 912
GTGCGCGCCTACCGCGTCGCCTACGACGGGCGCCCGTTCCACGGGTTCCAGCGCCAGCCGGCGGTCGCGACCGTCGCGGACGCGCTGCTCGACGCGCTCTCCGACCTCGACGTCCTCGCGGACGACGCGGACGTCCCGCCGAGGTGGGCGGCGGCCGGCCGGACCGACGCCGGCGTCTCGGCGGTCGCACAGACCGTCGCCTTCGAGGCGCCCGGGTGGCTCACCCCGCGGGCGTTCAACGCCGAGCTCCCCGGCTCGGTCCGCGTCTGGGCGAGCGCCGACGCCCCCGCGACGTTTCACGCCACCCACGACGCCACCCGACGGCGGTACGTCTACCACCTCCACGCCCCCGAGGCCGAGCCGGACGCCGCGCGGGCGGCCGCGGCGGCGCTGACCGGCGAACACGACGTCCACAACCTCACGCCCGACGAGACGGGAACCGTCCGCGACCTCGACGTCTCCGTCCGCCGGGGTGGAGCGGTCGACGACGACGGCGCGGACGCCGAAAGCGACGGGACCGCCGGCACCGACCGCCGTCCGGCCGCCGTCGCCCCCGAGGAGTTCCTCGTCTGTACGGTCGCCGCCGGCGGCTTCGCCCGCCAGCTCGTCAGGCGGCTGGTGAGCGTCCTCGCGGCGGTGGCGACCGGCGCGGCCGACCTCGGACGGGTCGACCGGGTGCTCGGGCCGGCGCCGCTGGACGGGCCGGCCGGGGTCGCGCCGGCGCCGGCGGAACCGCTGGTGTTGACCGACGTGGCGTACGCCGACGCTGGCCTCGACTTCGCGGTCGACGAGCGAGCCCGGGAGTCGGCGCTGACCGCGCTGGGCGAGCGCCGCGTCGCCGACCTCCGCGGCGTTCGGGCGACGGGGGCCGTGCTGCGTCGGCTCGAGACGGCTGGCTCGGACGGCGGGTAG
PROTEIN sequence
Length: 304
VRAYRVAYDGRPFHGFQRQPAVATVADALLDALSDLDVLADDADVPPRWAAAGRTDAGVSAVAQTVAFEAPGWLTPRAFNAELPGSVRVWASADAPATFHATHDATRRRYVYHLHAPEAEPDAARAAAAALTGEHDVHNLTPDETGTVRDLDVSVRRGGAVDDDGADAESDGTAGTDRRPAAVAPEEFLVCTVAAGGFARQLVRRLVSVLAAVATGAADLGRVDRVLGPAPLDGPAGVAPAPAEPLVLTDVAYADAGLDFAVDERARESALTALGERRVADLRGVRATGAVLRRLETAGSDGG*