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sw_5_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 188 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_18_1
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..1388)
DNA (1386bp) protein (462aa)
Uncharacterized protein (Fragment) n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0GU22_HALL2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDE57268.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_5_scaffold_18_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1574..1852
DNA (279bp) protein (93aa)
Transcriptional regulator, ArsR family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMP8_HALBP
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADQ66203.1}; Transcriptional regulator, arsr family protein {ECO:0000313|EMBL:ELY27302.1}; TaxID=469382 species="Archaea; Euryarchaeota; Haloba
sw_5_scaffold_18_3
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1914..2216
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03855.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_5_scaffold_18_4

Not on your lists

comp(2329..2820)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4YG28_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS10177.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_5_scaffold_18_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2914..3504)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4E8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40687.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_18_6
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3636..4928
DNA (1293bp) protein (431aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Probable glucose-6-phosphate isomerase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMK9_HALBP
Glucose-6-phosphate isomerase {ECO:0000313|EMBL:KKF39953.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
sw_5_scaffold_18_7

Not on your lists

5000..5761
DNA (762bp) protein (254aa)
Abortive infection protein n=1 Tax=halophilic archaeon DL31 RepID=G2MGM1_9ARCH
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:AEN06412.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_18_8

Not on your lists

comp(5828..7054)
DNA (1227bp) protein (409aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A0
glycerol-3-phosphate dehydrogenase n=1 Tax=Halomicrobium katesii RepID=UPI000368CD31
FAD dependent oxidoreductase
sw_5_scaffold_18_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7125..7583)
DNA (459bp) protein (153aa)
Nob1p-like protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IW20_9EURY
Nob1p-like protein {ECO:0000313|EMBL:ESP87357.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum t
Nob1p-like protein
sw_5_scaffold_18_10

Not on your lists

comp(7586..7831)
DNA (246bp) protein (82aa)
PRC-barrel domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MGL9_9ARCH
PRC-barrel domain-containing protein
PRC-barrel domain protein {ECO:0000313|EMBL:AEN06410.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_18_11
unknown

Not on your lists

comp(7956..8144)
DNA (189bp) protein (63aa)

This feature has no annotations

sw_5_scaffold_18_12
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8271..10067
DNA (1797bp) protein (599aa)
Probable translation initiation factor IF-2 n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NNN1_9EURY
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
translation initiation factor aIF-2 rbh
sw_5_scaffold_18_13
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10553..10969)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NM57_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66156.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_5_scaffold_18_14

Not on your lists

comp(11007..11477)
DNA (471bp) protein (157aa)
Pyruvoyl-dependent arginine decarboxylase n=1 Tax=halophilic archaeon DL31 RepID=G2MH81_9ARCH
pyruvoyl-dependent arginine decarboxylase
Pyruvoyl-dependent arginine decarboxylase {ECO:0000313|EMBL:AEN06327.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_18_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11533..12708)
DNA (1176bp) protein (392aa)
Proteasome-activating nucleotidase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4H9J4_9EURY
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
pan1; proteasome-activating nucleotidase
sw_5_scaffold_18_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12874..14682)
DNA (1809bp) protein (603aa)
Oligoendopeptidase F n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLF5_HALBP
oligopeptidase f
Oligoendopeptidase F {ECO:0000313|EMBL:ELY27452.1}; Oligopeptidase F {ECO:0000313|EMBL:ADQ66051.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeome
sw_5_scaffold_18_17

Not on your lists

14834..16255
DNA (1422bp) protein (474aa)
Peptidase M28 n=1 Tax=halophilic archaeon DL31 RepID=G2MMD1_9ARCH
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AEN06330.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_18_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16340..17251)
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFE6_9EURY
pseudouridylate synthase
sw_5_scaffold_18_19

Not on your lists


comp(17256..18560)
DNA (1305bp) protein (435aa)
histidyl-tRNA synthetase (EC:6.1.1.21) rbh
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=756883 species="Archaea.;" s
Histidine--tRNA ligase n=1 Tax=halophilic archaeon DL31 RepID=G2MMD4_9ARCH
sw_5_scaffold_18_20
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18658..19248)
DNA (591bp) protein (197aa)
Putative PP-loop ATPase n=1 Tax=Halonotius sp. J07HN4 RepID=U1PCY0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA58292.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_5_scaffold_18_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19259..19555)
DNA (297bp) protein (99aa)
hypothetical protein; K06875 programmed cell death protein 5 id=24616748 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-binding protein K933_14653 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candid
DNA-binding tfar19-related protein
sw_5_scaffold_18_22
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(19839..20294)
DNA (456bp) protein (152aa)
30S ribosomal protein S19e; K02966 small subunit ribosomal protein S19e id=24652575 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
30S ribosomal protein S19e
sw_5_scaffold_18_23
unknown

Not on your lists

comp(20390..21055)
DNA (666bp) protein (222aa)

This feature has no annotations

sw_5_scaffold_18_24

Not on your lists

comp(21103..22137)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MMD8_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06337.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_18_25

Not on your lists

22257..23141
DNA (885bp) protein (295aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-phosphate kinase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XT06_9ARCH
Thiamine-phosphate kinase {ECO:0000313|EMBL:ESS03236.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_5_scaffold_18_26

Not on your lists

comp(23209..24342)
DNA (1134bp) protein (378aa)
Peptidase M50 n=1 Tax=halophilic archaeon DL31 RepID=G2MME0_9ARCH
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:AEN06339.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_18_27
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24554..24817)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W6G4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY45034.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
sw_5_scaffold_18_28
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25993..26847)
DNA (855bp) protein (285aa)
Bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NL02_9EURY
Bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE {ECO:0000313|EMBL:EMA57809.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE
sw_5_scaffold_18_29
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26957..27676
DNA (720bp) protein (240aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055191}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055
Uridylate kinase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F797_9EURY
sw_5_scaffold_18_30
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27673..29394
DNA (1722bp) protein (574aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177, ECO:0000313|EMBL:ELZ89275.1};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=662480
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HXE0_9EURY
Displaying items 1-30 of 188 in total

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