ggKbase home page

sw_5_scaffold_293_16

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: 14237..15847

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=751944 species="Archaea; Euryar similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 564.0
  • Bit_score: 388
  • Evalue 2.10e-104
DNA-directed DNA polymerase n=1 Tax=Halobacterium sp. DL1 RepID=G4ICK7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 564.0
  • Bit_score: 388
  • Evalue 1.50e-104
DNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 543.0
  • Bit_score: 379
  • Evalue 2.00e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halobacterium sp. DL1 → Halobacterium → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1611
ATGGCAGTGGAAAACGACGAAGAGCTCAAAGAGCTTCTTGACGACCGCAATATAACAGTCAGCTCTTCTGGTAGAGAGCTCCTCCTTGCAGCCGACGACGTCGAGGAAGCCGTCCAAGCAGTTGAAGAACGATTTGCTGGACGCCTCGTTATCACTGCATCAAACATCAGAGATGTGGTTGACGTAGACTTGACTGAAGCCAACGGGAGCGAAGAAAGCAAGGACAGCGTCGATAAGGAAGATAACGACGATGACGAGGAAGACGAAGTAGAGGAAACCTACCGTGAGAAGGTTCGAGACACCTACATCACATGGGTGAACAGAGAGACAGCGAACTCAGCAGAGGCATTCGGTGAGGTGTCTGAAGACCCGTTCAGTGATATTGAAGAAGTCGACGAGGGGTCTGGAGTTGAACGAGAGGTTGGCGAGCGAGAATTCTCAATCTCTGAGGACGTGGCGTCTAGCTCTGAAGCTGAAGGAGAAATAGAAGACTTTGTCGCGTATTTCCGAAGTCGCTACGAAAGACTCTCAGGTATTTTGAAGCAGCGCTTGAGTCCGAAACCAATTGAGGCGCTTGGTGCTGGCTCACATTCTGACAGCATTACCGTCATCGGCATGGTTGTGGACAAGCGCAACACATCCTCGGGAAATCGCCTTCTAGAACTGGAAGATACGACAGGAACGACTCGTGTTGTATTCAGCGACGAGGAGGAAATAGAAATATGCGACCAAATCGTTAACGACGGAGTTATCGGTGTCCAAGGAACACTATCAGATGACGGAGGCATAATCTTCGGGGACAGGATTCACTTCCCAGAAGTTCCGCCGCGGCGCCGTACACGAACAGCAGACCGCGACGTGAAAGTCGCTCTCATCAGTGATGTCCACTTTGGAGCCCGAGAAATGGCAGTGGATAAGTGGAACCGTTTTGTAGAGTGGCTCCACAAACAAGACGGCATCGAGTACCTCCTCATCGCTGGCGACATTATCGAAGGCGTCGGAATTTATAACGGTCAGAAAGAGCAGCTGTCGGTTCAAACAATTGAACGACAGTACGACCTATGTCAGGCTGCGTTTGAGCAGCTACCAGATGACATCACTGTTGTTGTAACACCAGGTAACCACGACGGAGTTCCACAAGCTGAACCTCAGCCAACGTTCCCTGAGAAGTACAGAAACCGCTTCCCTGACAACATCCATTTCGGCCCCAACCCAGCAGTAGTCGACATTGAAGGCGTCAACTTCCTCATGTATCATGGTGTATCTATCCTACCATTTATCGACTTGCTGCCGAATGGTGACGTTCAAGAACCTGCGTCGGGCATGTGGCCAATGCTTCAAAAGAGACACATTGCTCCAATGTACGGTAAGGGTGTCCGCATCTCCCCAGAAAGAGAGGACAACTTAGTCATCGAAGAGGTCCCTGACGTAGTTCACTGCGGCCACGTTCACACTTTTGACCTTCACGAATATAATGGTGTGAAGTTAGTGAACACTGGGGCTTGGCAGCATCAGACTGACTACCAGCGACGGCTCGATATCACTCCAGATGTCGGATTCTGCCCTGTCTTCAACTTAGAGGATATGTCGGTTCAGCTTTACGGCTTCTGA
PROTEIN sequence
Length: 537
MAVENDEELKELLDDRNITVSSSGRELLLAADDVEEAVQAVEERFAGRLVITASNIRDVVDVDLTEANGSEESKDSVDKEDNDDDEEDEVEETYREKVRDTYITWVNRETANSAEAFGEVSEDPFSDIEEVDEGSGVEREVGEREFSISEDVASSSEAEGEIEDFVAYFRSRYERLSGILKQRLSPKPIEALGAGSHSDSITVIGMVVDKRNTSSGNRLLELEDTTGTTRVVFSDEEEIEICDQIVNDGVIGVQGTLSDDGGIIFGDRIHFPEVPPRRRTRTADRDVKVALISDVHFGAREMAVDKWNRFVEWLHKQDGIEYLLIAGDIIEGVGIYNGQKEQLSVQTIERQYDLCQAAFEQLPDDITVVVTPGNHDGVPQAEPQPTFPEKYRNRFPDNIHFGPNPAVVDIEGVNFLMYHGVSILPFIDLLPNGDVQEPASGMWPMLQKRHIAPMYGKGVRISPEREDNLVIEEVPDVVHCGHVHTFDLHEYNGVKLVNTGAWQHQTDYQRRLDITPDVGFCPVFNLEDMSVQLYGF*