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sw_5_scaffold_293

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_293_1
unknown

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

sw_5_scaffold_293_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(166..564)
DNA (399bp) protein (133aa)
Helicase / DNA excision repair protein ERCC-2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6S7_9EURY
Helicase / DNA excision repair protein ERCC-2 {ECO:0000313|EMBL:EMA53627.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
DNA helicase, Rad3
sw_5_scaffold_293_3
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(609..2555)
DNA (1947bp) protein (649aa)
Helicase c2 n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XDQ9_9EURY
Helicase c2 {ECO:0000313|EMBL:ELY59561.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.;"
DNA helicase, Rad3
sw_5_scaffold_293_4
unknown

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comp(2756..3025)
DNA (270bp) protein (90aa)

This feature has no annotations

sw_5_scaffold_293_5
unknown

Not on your lists

3366..3923
DNA (558bp) protein (186aa)

This feature has no annotations

sw_5_scaffold_293_6
unknown

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comp(3869..4135)
DNA (267bp) protein (89aa)

This feature has no annotations

sw_5_scaffold_293_7
unknown

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4189..4428
DNA (240bp) protein (80aa)

This feature has no annotations

sw_5_scaffold_293_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4595..8992)
DNA (4398bp) protein (1466aa)
Cell division control protein 21 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PG01_9EURY
DNA replication helicase protein MCM
Cell division control protein 21 {ECO:0000313|EMBL:ERJ07277.1}; DNA replication helicase protein MCM {ECO:0000313|EMBL:CCQ34186.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobac
sw_5_scaffold_293_9
unknown

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comp(9163..9501)
DNA (339bp) protein (113aa)

This feature has no annotations

sw_5_scaffold_293_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9631..10377
DNA (747bp) protein (249aa)
ABC transporter ATP-binding protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L940_HALJP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA29598.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japo
trp5; ABC transporter ATP-binding protein
sw_5_scaffold_293_11
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10374..12116
DNA (1743bp) protein (581aa)
ABC-type transport system permease n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IQJ4_9EURY
ABC-type transport system permease {ECO:0000313|EMBL:ELZ98985.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC
Na+ ABC efflux pump permease
sw_5_scaffold_293_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12235..13167
DNA (933bp) protein (311aa)
ABC-2 type transporter n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LEU3_9EURY
ABC-2 type transporter {ECO:0000313|EMBL:EMA31623.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
Na+ efflux pump ABC transporter permease
sw_5_scaffold_293_13
unknown

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comp(13164..13541)
DNA (378bp) protein (126aa)

This feature has no annotations

sw_5_scaffold_293_14
unknown

Not on your lists

comp(13528..13632)
DNA (105bp) protein (35aa)

This feature has no annotations

sw_5_scaffold_293_15
unknown

Not on your lists

comp(13632..14144)
DNA (513bp) protein (171aa)

This feature has no annotations

sw_5_scaffold_293_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14237..15847
DNA (1611bp) protein (537aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=751944 species="Archaea; Euryar
DNA-directed DNA polymerase n=1 Tax=Halobacterium sp. DL1 RepID=G4ICK7_9EURY
DNA-directed DNA polymerase
sw_5_scaffold_293_17
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15882..18323)
DNA (2442bp) protein (814aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1227453 species="Archaea; Euryarcha
Valine--tRNA ligase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LHT0_HALJP
sw_5_scaffold_293_18
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18647..19483
DNA (837bp) protein (279aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AW91_NATA1
sw_5_scaffold_293_19
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19516..21069
DNA (1554bp) protein (518aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUS5_9EURY
sw_5_scaffold_293_20
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21072..22166
DNA (1095bp) protein (365aa)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132, ECO:0000313|EMBL:ELY43641.1};; Type II DNA topoisomerase VI subunit A {ECO:0000256
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W2Y3_9EURY
DNA topoisomerase VI, subunit A
sw_5_scaffold_293_21
unknown

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comp(22176..22829)
DNA (654bp) protein (218aa)

This feature has no annotations

sw_5_scaffold_293_22
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22955..23824)
DNA (870bp) protein (290aa)
Putative metal-dependent hydrolase n=1 Tax=Natronococcus occultus SP4 RepID=L0K0G0_9EURY
putative metal-dependent hydrolase
Putative metal-dependent hydrolase {ECO:0000313|EMBL:AGB38045.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occult
sw_5_scaffold_293_23
unknown

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comp(23887..24135)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_5_scaffold_293_24
unknown

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comp(24132..24323)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_5_scaffold_293_25
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24444..24761)
DNA (318bp) protein (106aa)
PadR-like family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J487_HALJB
PadR-like family transcriptional regulator
PadR-like family transcriptional regulator {ECO:0000313|EMBL:ELY36112.1}; Transcriptional regulator, PadR-like family protein {ECO:0000313|EMBL:ADJ15479.1}; TaxID=795797 species="Archaea; Euryarchaeot
sw_5_scaffold_293_26

Not on your lists

24979..25422
DNA (444bp) protein (148aa)
Replication factor C small subunit n=1 Tax=uncultured archaeon A07HR60 RepID=V4XTW0_9ARCH
Replication factor C small subunit {ECO:0000313|EMBL:ESS12029.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
replication factor C
Displaying 26 items

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