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sw_5_scaffold_3172_3

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: comp(2283..3104)

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWT1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 263.0
  • Bit_score: 303
  • Evalue 2.50e-79
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDK39813.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.; similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 256.0
  • Bit_score: 303
  • Evalue 3.50e-79
MscS Mechanosensitive ion channel similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 225.0
  • Bit_score: 283
  • Evalue 5.80e-74

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Taxonomy

Halorubrum sp. AJ67 → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 822
TTGACGGTCCTGCAGGCGGGCCTCGGCGGCCTCGAACTGAACCTCCAGTTACTGCTCCAGACTGCCGGCGTCCTGCTCGGGGCGTACCTGCTCGCTCGCTTCGGCACGGTCGGCATCTCGGCGCTCGCCGAGCGCGTCCCGCGGCGGCGGATCGTCATCAACATGCTCGTCCCGGTCGTGAAGTTCGTCGTCTACGGGAGCGCGGTCTACGTCATCGCACGCCCCCTCTTGGACCTCTCGGCGACCCAGGTACTTGCGTTCTCGGGGGTGCTCGGGGCGGCGCTGGGGTTCGGCCTGAAGGACCTGTTCGCGGGCATCGTCGGCGGACTGGTCGTCATAATGGAGAAGCCCTACCGCGTCGGCGACAAAGTCGAGATCGACGGCAGTTACGGCGAGGTCACGGGCATCGGCCTCCGCTCGACGACGGTGACGACGCCGGACGATACCGACGTCCACGTACCGAACGCGGCGCTTTTTACCGAGAACGTCATAAACGAGAACGCGGGCGCCCCGGAAATGATGGTCGTCGTCGAGGTGGCGGTCGCCCGGAGCGCCGACATCGGTCCGGCGACCGACATCGTTGAGGAGGCGCTCGTGACCTCGAAGTACGTCGCCGTCGACGAGGAGCACCCGGTCTCCGTCGTCGTGGAGGACCGGGGCTACCACCGGGTGCTCAAGGGGAGGGCCTACGTGGCGGACCTCCGCGACGAGTTCGCCTTCTCCTCGGACGTGACCGAGCGGACCCTTGCCGCCTTCGAGGAAGCGGGCATCGAGTCCCCGGGACTGCCCGAGCGAGCCGCGTCCGGCCCGTCCATGGAGTGA
PROTEIN sequence
Length: 274
LTVLQAGLGGLELNLQLLLQTAGVLLGAYLLARFGTVGISALAERVPRRRIVINMLVPVVKFVVYGSAVYVIARPLLDLSATQVLAFSGVLGAALGFGLKDLFAGIVGGLVVIMEKPYRVGDKVEIDGSYGEVTGIGLRSTTVTTPDDTDVHVPNAALFTENVINENAGAPEMMVVVEVAVARSADIGPATDIVEEALVTSKYVAVDEEHPVSVVVEDRGYHRVLKGRAYVADLRDEFAFSSDVTERTLAAFEEAGIESPGLPERAASGPSME*