ggKbase home page

sw_5_scaffold_3172

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_3172_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(351..974)
DNA (624bp) protein (208aa)
purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929};; 5-(carboxyam
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRK7_NATPD
sw_5_scaffold_3172_2
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1059..2156)
DNA (1098bp) protein (366aa)
purK; phosphoribosylaminoimidazole carboxylase ATP binding subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZQ88_9EURY
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
sw_5_scaffold_3172_3
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2283..3104)
DNA (822bp) protein (274aa)
MscS Mechanosensitive ion channel n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWT1_9EURY
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDK39813.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;
MscS Mechanosensitive ion channel
sw_5_scaffold_3172_4
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3101..4171)
DNA (1071bp) protein (357aa)
Uncharacterized protein domain protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DUF3_9EURY
Uncharacterized protein domain protein {ECO:0000313|EMBL:CDK39812.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. A
hypothetical protein
sw_5_scaffold_3172_5
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4228..5184
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NZ90_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA61880.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_5_scaffold_3172_6
unknown

Not on your lists

5412..5606
DNA (195bp) protein (65aa)

This feature has no annotations

sw_5_scaffold_3172_7
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5603..6868
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00036D06A1
Conserved repeat domain protein {ECO:0000313|EMBL:EMA61809.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum
conserved repeat domain protein
sw_5_scaffold_3172_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6865..7449
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HDI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88138.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_5_scaffold_3172_9
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7460..8428)
DNA (969bp) protein (323aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DSG8_9EURY
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ELZ37049.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source
moxR2; methanol dehydrogenase regulatory protein
sw_5_scaffold_3172_10
unknown

Not on your lists

8666..8767
DNA (102bp) protein (34aa)

This feature has no annotations

sw_5_scaffold_3172_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8851..9120
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JSZ9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA12101.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_5_scaffold_3172_trna_1
unknown

Not on your lists

comp(9136..9210)
DNA (75bp)
transferRNA
sw_5_scaffold_3172_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9271..9795)
DNA (525bp) protein (175aa)
GtrA-like family protein id=24613395 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
GtrA-like family protein, cell surface polysaccharide biosynthesis protein {ECO:0000313|EMBL:ESP90030.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
sugar translocase
sw_5_scaffold_3172_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9792..10580)
DNA (789bp) protein (263aa)
gtl3; probable glycosyltransferase, type 2 (EC:2.4.-.-)
Probable glycosyltransferase, type 2 {ECO:0000313|EMBL:CCQ36073.1}; EC=2.4.-.- {ECO:0000313|EMBL:CCQ36073.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
Probable glycosyltransferase, type 2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK7_NATM8
sw_5_scaffold_3172_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11436..12626
DNA (1191bp) protein (397aa)
DUF2298 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISS5_NATPD
hypothetical protein
DUF2298 family protein {ECO:0000313|EMBL:CAI48810.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
Displaying 15 items

View Taxonomy