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sw_5_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_32_1
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

455..1138
DNA (684bp) protein (228aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
Deoxyribose-phosphate aldolase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9SZX0_9CYAN
deoxyribose-phosphate aldolase
sw_5_scaffold_32_2
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

1354..2070
DNA (717bp) protein (239aa)
DNA repair protein RecO n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T156_9CYAN
DNA replication and repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleu
sw_5_scaffold_32_3
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2138..3556
DNA (1419bp) protein (473aa)
Transporter, major facilitator family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VPG8_9CYAN
Transporter, major facilitator family {ECO:0000313|EMBL:EDX75991.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus c
major facilitator superfamily protein
sw_5_scaffold_32_4
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3662..4804
DNA (1143bp) protein (381aa)
Glycosyl transferase group 1 n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7K8N9_CYAP7
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACK71237.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (
sw_5_scaffold_32_5
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4806..5567)
DNA (762bp) protein (254aa)
Putative Zn-dependent protease n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W7E2_9CYAN
Zn-dependent protease
Putative Zn-dependent protease {ECO:0000313|EMBL:AFZ16300.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcol
sw_5_scaffold_32_6
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(5691..5921)
DNA (231bp) protein (77aa)
Preprotein translocase, SecG subunit n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XXC1_STAC7
preprotein translocase, SecG subunit
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:AFZ36317.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC
sw_5_scaffold_32_7
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5952..7550)
DNA (1599bp) protein (533aa)
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W045_9CYAN
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
sw_5_scaffold_32_8
unknown

Not on your lists

comp(8113..8268)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_5_scaffold_32_9
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(8386..9480)
DNA (1095bp) protein (365aa)
Peptide chain release factor 1 n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T9N3_9CYAN
peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="P
sw_5_scaffold_32_10
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(9712..9960)
DNA (249bp) protein (83aa)
50S ribosomal protein L31 n=1 Tax=Geminocystis herdmanii RepID=UPI00034BEE09
50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source
sw_5_scaffold_32_11
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists


comp(10138..10551)
DNA (414bp) protein (138aa)
30S ribosomal protein S9 n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T735_9CYAN
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 732
sw_5_scaffold_32_12
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists


comp(10551..11006)
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T9C5_9CYAN
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 73
sw_5_scaffold_32_13
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11028..11837)
DNA (810bp) protein (270aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C428_ACAM1
truA; tRNA pseudouridine synthase A
sw_5_scaffold_32_14
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(11855..12205)
DNA (351bp) protein (117aa)
50S ribosomal protein L17 n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9Q5Z1_9CYAN
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" sourc
sw_5_scaffold_32_15
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12238..13185)
DNA (948bp) protein (316aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DNQ6_9CHRO
sw_5_scaffold_32_16
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(13297..13689)
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UJB0_CYAP2
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822)
sw_5_scaffold_32_17
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(13729..14112)
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WP11_9CYAN
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_5_scaffold_32_18
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14377..14601)
DNA (225bp) protein (75aa)
Translation initiation factor IF-1 n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VPM5_9CYAN
infA; translation initiation factor IF-1 InfA
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain
sw_5_scaffold_32_19
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(14808..15371)
DNA (564bp) protein (188aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T8E2_9CYAN
adenylate kinase family protein
sw_5_scaffold_32_20
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(15499..16842)
DNA (1344bp) protein (448aa)
Protein translocase subunit SecY n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9Z094_DACSA
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.
sw_5_scaffold_32_21
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(16982..17425)
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Moorea producens 3L RepID=F4Y393_9CYAN
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moo
50S ribosomal protein L15
sw_5_scaffold_32_22
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(17462..17980)
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Spirulina subsalsa RepID=UPI0002DE1AC6
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cy
sw_5_scaffold_32_23
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists


comp(18159..18521)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QYY7_NOSS7
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
sw_5_scaffold_32_24
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(18524..19063)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WNZ8_9CYAN
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source
sw_5_scaffold_32_25
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(19083..19484)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YFK8_HALP7
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (s
sw_5_scaffold_32_26
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(19522..20067)
DNA (546bp) protein (182aa)
50S ribosomal protein L5 n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W064_9CYAN
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;
sw_5_scaffold_32_27
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(20204..20554)
DNA (351bp) protein (117aa)
50S ribosomal protein L24 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YFV6_HALP7
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (
sw_5_scaffold_32_28
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(20554..20925)
DNA (372bp) protein (124aa)
50S ribosomal protein L14 n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DRA0_9CHRO
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source=
50S ribosomal protein L14
sw_5_scaffold_32_29
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(21011..21265)
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z2R2_CYAAP
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=755178 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" sourc
sw_5_scaffold_32_30
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists


comp(21272..21499)
DNA (228bp) protein (76aa)
50S ribosomal protein L29 n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI00030D2644
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
50S ribosomal protein L29
Displaying items 1-30 of 47 in total

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