ggKbase home page

sw_5_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 35 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_20_1
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(284..964)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI00030D653D
low-complexity protein
Putative low-complexity protein {ECO:0000313|EMBL:AFZ16594.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;
sw_5_scaffold_20_2
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(984..2393)
DNA (1410bp) protein (470aa)
Putative sensor protein/domain protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W8Q5_9CYAN
sensor protein/domain-containing protein
Putative sensor protein/domain protein {ECO:0000313|EMBL:AFZ16593.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC
sw_5_scaffold_20_3
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2431..3879)
DNA (1449bp) protein (483aa)
Fe-S oxidoreductase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YUA6_DACSA
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:AFZ50092.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.;"
sw_5_scaffold_20_4
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4473..4793
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B7JZ21_CYAP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK66098.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synec
sw_5_scaffold_20_5
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

4946..5335
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7K9P0_CYAP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY77405.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_5_scaffold_20_6
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5398..7539
DNA (2142bp) protein (714aa)
glycine oxidase ThiO (EC:1.4.3.19)
thiazole synthase n=1 Tax=Fischerella muscicola RepID=UPI0002DD4791
Thiazole synthase {ECO:0000313|EMBL:KIJ74154.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
sw_5_scaffold_20_7
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7894..10344)
DNA (2451bp) protein (817aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W0K8_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX72347.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
WD40 repeat-containing protein
sw_5_scaffold_20_8
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10826..11431)
DNA (606bp) protein (202aa)
4-hydroxybenzoate synthetase (EC:4.1.3.40)
4-hydroxybenzoate synthetase (Chorismate lyase) {ECO:0000313|EMBL:AFZ18637.1}; EC=4.1.3.40 {ECO:0000313|EMBL:AFZ18637.1};; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillator
4-hydroxybenzoate synthetase (Chorismate lyase) n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WGL0_9CYAN
sw_5_scaffold_20_9
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11618..13516)
DNA (1899bp) protein (633aa)
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatorio
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y780_HALP7
sw_5_scaffold_20_10
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13826..15052)
DNA (1227bp) protein (409aa)
Ferredoxin--NADP reductase {ECO:0000256|RuleBase:RU004465}; EC=1.18.1.2 {ECO:0000256|RuleBase:RU004465};; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chrooc
Ferredoxin--NADP reductase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y8M7_HALP7
oxidoreductase FAD/NAD(P)-binding domain-containing protein
sw_5_scaffold_20_11
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15599..16606
DNA (1008bp) protein (336aa)
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.
Phosphoribulokinase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YU48_DACSA
uridine kinase
sw_5_scaffold_20_12
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17150..17731)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QDX8_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ERT06094.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
hypothetical protein
sw_5_scaffold_20_13
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18025..19956)
DNA (1932bp) protein (644aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YUL7_DACSA
glucose-inhibited division protein A
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=13035 species="Bacteri
sw_5_scaffold_20_14
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(20116..21900)
DNA (1785bp) protein (595aa)
Serine/threonine protein kinase n=1 Tax=Arthrospira maxima CS-328 RepID=B5VUJ2_ARTMA
Serine/threonine protein kinase {ECO:0000313|EMBL:KIJ74588.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.
serine/threonine protein kinase
sw_5_scaffold_20_15
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22056..22373
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WMY7_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ21775.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_5_scaffold_20_16
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22420..23784
DNA (1365bp) protein (455aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YHI6_HALP7
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AFZ45850.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece
sw_5_scaffold_20_17
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24128..25666
DNA (1539bp) protein (513aa)
Photosystem II chlorophyll-binding protein CP47 n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GMA2_9CYAN
photosystem II chlorophyll-binding protein CP47
Photosystem II CP47 reaction center protein {ECO:0000256|HAMAP-Rule:MF_01495}; PSII 47 kDa protein {ECO:0000256|HAMAP-Rule:MF_01495}; Protein CP-47 {ECO:0000256|HAMAP-Rule:MF_01495}; TaxID=13035 speci
sw_5_scaffold_20_18
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26213..26755
DNA (543bp) protein (181aa)
Transcriptional repressor NrdR n=2 Tax=Cyanothece RepID=NRDR_CYAP8
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000255|HAMAP-Rule:MF_00440}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8
sw_5_scaffold_20_19
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


27139..28155
DNA (1017bp) protein (339aa)
RNA binding S1 domain protein n=2 Tax=Cyanothece RepID=B7JX65_CYAP8
30S ribosomal protein S1
RNA binding S1 domain protein {ECO:0000313|EMBL:ACK67053.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801)
sw_5_scaffold_20_20
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

28255..28995
DNA (741bp) protein (247aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T643_9CYAN
haloacid dehalogenase superfamily protein
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:AFY78332.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_5_scaffold_20_21
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

29227..30492
DNA (1266bp) protein (422aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DER5_9CHRO
sw_5_scaffold_20_22
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(30634..31182)
DNA (549bp) protein (183aa)
Late competence development protein ComFB n=2 Tax=Chlorogloeopsis RepID=UPI000309DF19
late competence development protein ComFB
Late competence development protein ComFB {ECO:0000313|EMBL:AFY56981.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
sw_5_scaffold_20_23
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(31361..32362)
DNA (1002bp) protein (334aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9Z055_DACSA
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AFZ52112.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" sou
sw_5_scaffold_20_24
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

32700..34979
DNA (2280bp) protein (760aa)
Kef-type K+ transport system, membrane component n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WJR1_9CYAN
Kef-type K+ transport system membrane protein
Kef-type K+ transport system, membrane component {ECO:0000313|EMBL:AFZ20051.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;
sw_5_scaffold_20_25
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(35062..35328)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000347949E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK73494.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synec
sw_5_scaffold_20_26
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

35360..36199
DNA (840bp) protein (280aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T484_9CYAN
sw_5_scaffold_20_27
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

36637..37773
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YD98_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44824.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_5_scaffold_20_trna_1
unknown

Not on your lists

37930..38012
DNA (83bp)
transferRNA
sw_5_scaffold_20_trna_2
unknown

Not on your lists

38056..38127
DNA (72bp)
transferRNA
sw_5_scaffold_20_28
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(38165..39115)
DNA (951bp) protein (317aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T345_9CYAN
4-hydroxybenzoate polyprenyltransferase
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:AFY77282.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="P
Displaying items 1-30 of 35 in total

View Taxonomy