ggKbase home page

sw_5_scaffold_89

Search features with annotation key words

Displaying items 1-30 of 42 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_89_1
unknown

Not on your lists

comp(39..278)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_5_scaffold_89_2
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

328..1107
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QA87_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ERT04738.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
hypothetical protein
sw_5_scaffold_89_3
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

1242..2366
DNA (1125bp) protein (375aa)
Calcium/proton antiporter, CaCA family n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XM17_STAC7
calcium/proton antiporter, CaCA family
Calcium/proton antiporter, CaCA family {ECO:0000313|EMBL:AFZ33640.1}; Flags: Precursor;; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (str
sw_5_scaffold_89_4
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2720..4405
DNA (1686bp) protein (562aa)
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
Dihydroxy-acid dehydratase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WFJ4_9CYAN
sw_5_scaffold_89_5
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4747..5343
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034945A3
Uncharacterized protein {ECO:0000313|EMBL:GAE09675.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
hypothetical protein
sw_5_scaffold_89_6
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5689..6762
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VH68_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX78361.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
tocopherol cyclase
sw_5_scaffold_89_trna_1
unknown

Not on your lists

6969..7042
DNA (74bp)
transferRNA
sw_5_scaffold_89_7
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7250..7888
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W0Y9_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ13464.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
sw_5_scaffold_89_8
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7872..8177)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VH64_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX78777.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
hypothetical protein
sw_5_scaffold_89_9
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(8319..8957)
DNA (639bp) protein (213aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; Flags: Precursor;; TaxID=251229 species="Bacteria; Cyanobacteria; Pleuroca
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TTS4_9CYAN
sw_5_scaffold_89_10
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(9088..9981)
DNA (894bp) protein (298aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T0D8_9CYAN
malonyl CoA-acyl carrier protein transacylase
sw_5_scaffold_89_11
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10048..11028)
DNA (981bp) protein (327aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Lyngbya aestuarii BL J RepID=U7QDB1_9CYAN
sw_5_scaffold_89_12
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11250..12311)
DNA (1062bp) protein (354aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WI06_9CYAN
phosphate:acyl-(acyl carrier protein) acyltransferase
sw_5_scaffold_89_13
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13107..13280
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ITB7_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:EAZ90302.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
peptidase S13 D-Ala-D-Ala carboxypeptidase C
sw_5_scaffold_89_14
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13745..14914)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WIP7_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ19412.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp.
sw_5_scaffold_89_15
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(14931..15536)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034B3CF9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY79418.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_5_scaffold_89_16
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(15646..17253)
DNA (1608bp) protein (536aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YTB2_DACSA
methionyl-tRNA synthetase
sw_5_scaffold_89_17
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17616..18296
DNA (681bp) protein (227aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VZA4_9CYAN
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AFZ13453.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum P
sw_5_scaffold_89_18
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18517..19329
DNA (813bp) protein (271aa)
Lysophospholipase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YUF2_DACSA
lysophospholipase
Lysophospholipase {ECO:0000313|EMBL:AFZ50137.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.;"
sw_5_scaffold_89_19
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

19446..20321
DNA (876bp) protein (292aa)
Fatty acid desaturase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T7L0_9CYAN
fatty acid desaturase
Fatty acid desaturase {ECO:0000313|EMBL:AFY78403.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_5_scaffold_89_20
unknown

Not on your lists

20318..20407
DNA (90bp) protein (30aa)

This feature has no annotations

sw_5_scaffold_89_21
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20437..20856)
DNA (420bp) protein (140aa)
monofunctional chorismate mutase (EC:5.4.99.5)
Monofunctional chorismate mutase, clade 1 {ECO:0000313|EMBL:AFZ19405.1}; EC=5.4.99.5 {ECO:0000313|EMBL:AFZ19405.1};; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoria
Monofunctional chorismate mutase, clade 1 n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WG64_9CYAN
sw_5_scaffold_89_22
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(20958..21779)
DNA (822bp) protein (274aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T2J9_9CYAN
signal peptide peptidase SppA, 36K type
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:AFY76663.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_5_scaffold_89_23
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22012..23064
DNA (1053bp) protein (351aa)
Integral membrane protein DUF6 n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VSF2_9CYAN
Integral membrane protein DUF6 {ECO:0000313|EMBL:EDX75090.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonop
DMT(drug/metabolite transporter) superfamily permease
sw_5_scaffold_89_24
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(23108..24325)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XPA1_STAC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ34358.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
sw_5_scaffold_89_25
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24980..25873)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XYL4_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ30301.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
sw_5_scaffold_89_26
unknown

Not on your lists

comp(25962..26174)
DNA (213bp) protein (71aa)

This feature has no annotations

sw_5_scaffold_89_27
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26289..28310)
DNA (2022bp) protein (674aa)
Asparagine synthetase n=1 Tax=Moorea producens 3L RepID=F4XYL9_9CYAN
Glutamine-hydrolyzing asparagine synthase {ECO:0000313|EMBL:EGJ30306.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
asparagine synthase
sw_5_scaffold_89_28
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(28307..28516)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XYM0_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ30307.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
sw_5_scaffold_89_29
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(28513..28752)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XYM0_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ30307.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
Displaying items 1-30 of 42 in total

View Taxonomy