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sw_5_scaffold_14

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Displaying items 1-30 of 186 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_14_1

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1..606
DNA (606bp) protein (202aa)
Putative exonuclease RecJ n=1 Tax=halophilic archaeon DL31 RepID=G2MIM9_9ARCH
putative exonuclease RecJ
Putative exonuclease RecJ {ECO:0000313|EMBL:AEN04810.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_14_2
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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603..950
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EA71_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ43938.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_5_scaffold_14_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


947..1588
DNA (642bp) protein (214aa)
30S ribosomal protein S3Ae n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SSY4_9EURY
30S ribosomal protein S3ae
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=469382 species="Archaea; Euryarchaeota; Halo
sw_5_scaffold_14_4
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1659..2084)
DNA (426bp) protein (142aa)
Blue (Type 1) copper domain protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DR51_9EURY
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ELZ37965.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharo
blue (type 1) copper domain-containing protein
sw_5_scaffold_14_5
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2187..2945
DNA (759bp) protein (253aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IR91_9EURY
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:ELZ98512.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halo
sw_5_scaffold_14_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3043..3336)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20646.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_14_7
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3518..4516)
DNA (999bp) protein (333aa)
tfbB; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB id=24643796 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" s
transcription initiation factor IIB rbh
sw_5_scaffold_14_8
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4811..5098
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
aatC; aspartyl-tRNA(Asn) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Halogranum salarium B-1 RepID=J3EYF0_9EURY
sw_5_scaffold_14_9

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5102..6418
DNA (1317bp) protein (439aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=141287
aatA; aspartyl-tRNA(Asn) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=uncultured archaeon A07HB70 RepID=V4XY87_9ARCH
sw_5_scaffold_14_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6485..7165
DNA (681bp) protein (227aa)
TrkA domain protein n=2 Tax=Halobacterium salinarum RepID=B0R2T9_HALS3
trkA1; TrkA domain-containing protein
TRK potassium uptake system protein {ECO:0000313|EMBL:AAG18790.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium
sw_5_scaffold_14_11
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7179..7718)
DNA (540bp) protein (180aa)
Polyketide cyclase/dehydrase family protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IVY7_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA22292.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
polyketide cyclase
sw_5_scaffold_14_12
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7867..8631
DNA (765bp) protein (255aa)
2-phosphosulfolactate phosphatase {ECO:0000313|EMBL:CCQ33576.1}; Putative 2-phosphosulfolactate phosphatase protein {ECO:0000313|EMBL:ERJ05462.1}; EC=3.1.3.71 {ECO:0000313|EMBL:ERJ05462.1};; TaxID=103
2-phosphosulfolactate phosphatase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJC0_9EURY
2-phosphosulfolactate phosphatase
sw_5_scaffold_14_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8716..10695
DNA (1980bp) protein (660aa)
xenobiotic-transporting ATPase id=24614118 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:ESP89416.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
ABC transporter-like protein
sw_5_scaffold_14_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10768..11286
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4P9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29139.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_14_15
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11349..11822)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JQ84_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA10518.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_5_scaffold_14_16
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11907..13091
DNA (1185bp) protein (395aa)
Pantothenate metabolism flavoprotein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3G8_HALMT
dfp; pantothenate metabolism flavoprotein
DNA/pantothenate metabolism flavoprotein {ECO:0000313|EMBL:AHZ21853.1}; Pantothenate metabolism flavoprotein {ECO:0000313|EMBL:AFK18778.1}; Phosphopantothenoylcysteine decarboxylase/phosphopantothenat
sw_5_scaffold_14_17
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13105..13479)
DNA (375bp) protein (125aa)
Multisubunit Na+/H+ antiporter, MnhG subunit n=1 Tax=halophilic archaeon J07HB67 RepID=U1P920_9EURY
Multisubunit Na+/H+ antiporter, MnhG subunit {ECO:0000313|EMBL:ERH13260.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
monovalent cation/proton antiporter, mnhg/phag subunit
sw_5_scaffold_14_18
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13482..13766)
DNA (285bp) protein (95aa)
Multisubunit Na+/H+ antiporter, MnhF subunit n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQD7_HALBP
multisubunit na+/h+ antiporter, mnhf subunit
Multisubunit Na+/H+ antiporter, MnhF subunit {ECO:0000313|EMBL:ADQ67810.1}; Multisubunit na+/h+ antiporter, mnhf subunit {ECO:0000313|EMBL:ELY23508.1}; Flags: Precursor;; TaxID=469382 species="Archaea
sw_5_scaffold_14_19
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13759..14424)
DNA (666bp) protein (222aa)
Multiple resistance/pH regulation related protein E n=2 Tax=Haloferax RepID=M0GRA4_HALL2
Multiple resistance/pH regulation related protein E {ECO:0000313|EMBL:ELZ92075.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halo
mrpE; multiple resistance/pH regulation related protein E
sw_5_scaffold_14_20

Not on your lists

comp(14421..16259)
DNA (1839bp) protein (613aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5) rbh
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:AEN06055.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AEN06055.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
NADH dehydrogenase (Quinone) n=1 Tax=halophilic archaeon DL31 RepID=G2MGW5_9ARCH
sw_5_scaffold_14_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16259..16606)
DNA (348bp) protein (116aa)
Multisubunit sodium/proton antiporter subunit MrpC n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CU02_9EURY
Multisubunit sodium/proton antiporter subunit MrpC {ECO:0000313|EMBL:ELZ26730.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
multisubunit sodium/proton antiporter subunit MrpC
sw_5_scaffold_14_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16603..17055)
DNA (453bp) protein (151aa)
Multisubunit na+/h+ antiporter, mnhb subunit n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HNC0_9EURY
Multisubunit na+/h+ antiporter, mnhb subunit {ECO:0000313|EMBL:ESP89409.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" sour
Na+/H+ antiporter MnhB subunit-like protein
sw_5_scaffold_14_23
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17052..19433)
DNA (2382bp) protein (794aa)
Na(+)/H(+) antiporter subunit A n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IRH7_9EURY
Na(+)/H(+) antiporter subunit A {ECO:0000313|EMBL:CQR50445.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
mrpA; Na(+)/H(+) antiporter subunit A
sw_5_scaffold_14_24
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19571..20137
DNA (567bp) protein (189aa)
HGPRTase-like protein {ECO:0000256|HAMAP-Rule:MF_01467}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_01467};; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halo
adenine phosphoribosyltransferase (EC:2.4.2.7)
HGPRTase-like protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0GYL1_9EURY
sw_5_scaffold_14_25
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20471..22315
DNA (1845bp) protein (615aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CTZ7_9EURY
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ26725.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
extracellular solute-binding protein, family 5
sw_5_scaffold_14_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22350..23324
DNA (975bp) protein (325aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM26_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA45485.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
binding-protein-dependent transporters inner membrane component
sw_5_scaffold_14_27
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23330..24520
DNA (1191bp) protein (397aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=halophilic archaeon J07HB67 RepID=U1PNB9_9EURY
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ERH11644.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halop
binding-protein-dependent transporters inner membrane component
sw_5_scaffold_14_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24517..25575
DNA (1059bp) protein (353aa)
Peptide ABC transporter ATPase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWK7_9EURY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EMA50107.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
dppD; ABC-type transport system ATP-binding protein (probable substrate dipeptide/oligopeptide/nickel)
sw_5_scaffold_14_29

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25568..26917
DNA (1350bp) protein (450aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YI85_9ARCH
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain protein {ECO:0000313|EMBL:ESS11062.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archae
peptide ABC transporter ATPase
sw_5_scaffold_14_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26998..27693
DNA (696bp) protein (232aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X6V3_9EURY
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:ELZ30287.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
DJ-1/PfpI/ThiJ superfamily protein
Displaying items 1-30 of 186 in total

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