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sw_5_scaffold_43

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Displaying items 1-30 of 236 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_43_1

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3..1043
DNA (1041bp) protein (347aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AEN06520.1}; EC=2.6.1.42 {ECO:0000313|EMBL:AEN06520.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Branched-chain amino acid aminotransferase n=1 Tax=halophilic archaeon DL31 RepID=G2MHC5_9ARCH
sw_5_scaffold_43_2
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1156..2319
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W768_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELY45091.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens JC
acyl-CoA dehydrogenase
sw_5_scaffold_43_3

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comp(2360..2716)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHQ2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06868.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_43_4

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comp(2860..5049)
DNA (2190bp) protein (730aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHN5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AEN06851.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
hypothetical protein rbh
sw_5_scaffold_43_5

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comp(5150..5917)
DNA (768bp) protein (256aa)
Cobalt transporter n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WRK6_9EURY
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN06849.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_43_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5917..6651)
DNA (735bp) protein (245aa)
ABC transporter n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FIG2_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ59098.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
ABC transporter
sw_5_scaffold_43_7
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6659..7240)
DNA (582bp) protein (194aa)
biotin biosynthesis protein BioY n=1 Tax=Halorubrum sp. T3 RepID=UPI0003780172
BioY protein {ECO:0000313|EMBL:ELZ34364.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
BioY protein
sw_5_scaffold_43_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7467..8069
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59651.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_43_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8173..8838
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=L5NW83_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59650.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_43_10
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8863..9444)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59649.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sua5; DNA binding protein, translation factor
sw_5_scaffold_43_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9514..10032)
DNA (519bp) protein (173aa)
Alkyl hydroperoxide reductase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IZS9_9EURY
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:ESP88657.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
alkyl hydroperoxide reductase
sw_5_scaffold_43_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10032..10304)
DNA (273bp) protein (91aa)
Glutathione S-transferase n=2 Tax=Haloarcula hispanica RepID=G0HU37_HALHT
gst3; glutathione S-transferase
Glutaredoxin {ECO:0000313|EMBL:AHB67318.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_5_scaffold_43_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10416..11783
DNA (1368bp) protein (456aa)
Cbs domain-containing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D6W3_9EURY
Cbs domain-containing protein {ECO:0000313|EMBL:ELZ30427.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pall
hypothetical protein
sw_5_scaffold_43_14

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comp(11818..13050)
DNA (1233bp) protein (411aa)
Phosphate transporter n=1 Tax=halophilic archaeon DL31 RepID=G2MKE7_9ARCH
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:AEN04744.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_43_15
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13060..13230)
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ73949.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
sw_5_scaffold_43_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13519..14028)
DNA (510bp) protein (170aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halo
Phosphoesterase, mj0936 family n=1 Tax=Halogranum salarium B-1 RepID=J3JFX7_9EURY
phosphoesterase
sw_5_scaffold_43_17
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14162..15109
DNA (948bp) protein (316aa)
Cation diffusion facilitator family transporter n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y6F2_9ARCH
Ferrous-iron efflux pump FieF {ECO:0000313|EMBL:CQR51410.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
cat; cation efflux protein
sw_5_scaffold_43_18
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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15106..15756
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GZB8_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE03370.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_5_scaffold_43_19
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16321..16962)
DNA (642bp) protein (214aa)
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily id=24616527 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Putative haloacid dehalogenase hydrolase {ECO:0000313|EMBL:ESP87500.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="
HAD-superfamily hydrolase, subfamily IA, variant 1
sw_5_scaffold_43_20

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comp(17074..17817)
DNA (744bp) protein (248aa)
Monomeric archaeal DNA polymerase sliding clamp n=1 Tax=uncultured archaeon A07HR60 RepID=V4YAP0_9ARCH
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1412874 species="Arch
DNA polymerase sliding clamp
sw_5_scaffold_43_21
unknown

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comp(18213..18425)
DNA (213bp) protein (71aa)

This feature has no annotations

sw_5_scaffold_43_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18509..19297
DNA (789bp) protein (263aa)
ribosomal RNA large subunit methyltransferase E; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] id=24616529 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
ribosomal RNA methyltransferase RrmJ/FtsJ
sw_5_scaffold_43_23

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comp(19326..20057)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MN57_9ARCH
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEN06986.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_43_24
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(20044..20226)
DNA (183bp) protein (61aa)
Transcription regulator n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HHW9_9EURY
Transcription regulator {ECO:0000313|EMBL:ESP87504.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
transcription regulator
sw_5_scaffold_43_25

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comp(20266..23067)
DNA (2802bp) protein (934aa)
Sec-independent periplasmic protein translocase n=1 Tax=halophilic archaeon DL31 RepID=G2MN55_9ARCH
Sec-independent periplasmic protein translocase
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:AEN06984.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_43_26
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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23164..24306
DNA (1143bp) protein (381aa)
Sec-independent protein translocase component TatC1 n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GVW5_9EURY
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Hal
sec-independent protein secretion pathway component tatc
sw_5_scaffold_43_27
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(24508..25374)
DNA (867bp) protein (289aa)
TIGR00268 family protein n=1 Tax=Halorubrum sp. J07HR59 RepID=U1Q9K6_9EURY
TIGR00268 family protein {ECO:0000313|EMBL:ERH03293.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
hypothetical protein
sw_5_scaffold_43_28
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25482..26111)
DNA (630bp) protein (210aa)
hypothetical protein id=24615946 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88150.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
sw_5_scaffold_43_29
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26286..27239)
DNA (954bp) protein (318aa)
pyruvate formate-lyase-activating protein; K07129 id=24614489 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Pyruvate formate-lyase-activating protein {ECO:0000313|EMBL:ESP89001.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
Radical SAM domain protein
sw_5_scaffold_43_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(27365..28126)
DNA (762bp) protein (254aa)
Purine or other phosphorylase family 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFT3_9EURY
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:EMA55520.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
purine or other phosphorylase family 1
Displaying items 1-30 of 236 in total

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