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sw_5_scaffold_1174

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1174_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(138..920)
DNA (783bp) protein (261aa)
DNA N-glycosylase {ECO:0000313|EMBL:CAI50176.1}; EC=3.2.2.- {ECO:0000313|EMBL:CAI50176.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
3-methyladenine DNA glycosylase n=1 Tax=Halomicrobium katesii RepID=UPI0003628561
DNA N-glycosylase / DNA lyase
sw_5_scaffold_1174_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(998..1741)
DNA (744bp) protein (248aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1U3_9EURY
proteasome subunit beta
sw_5_scaffold_1174_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1979..2356
DNA (378bp) protein (126aa)
UPF0212 protein C474_02755 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DFE5_9EURY
UPF0212 protein C474_02755 {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pal
hypothetical protein
sw_5_scaffold_1174_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2411..3703)
DNA (1293bp) protein (431aa)
Arabinose efflux permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME86_9EURY
Arabinose efflux permease {ECO:0000313|EMBL:EMA44036.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
arabinose efflux permease
sw_5_scaffold_1174_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4148..4471)
DNA (324bp) protein (108aa)
Twin arginine translocation system subunit TatA n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKM7_NATM8
tatA1; twin arginine translocation system subunit TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sourc
sw_5_scaffold_1174_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4569..5042
DNA (474bp) protein (158aa)
Peroxiredoxin n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPA2_HALBP
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:ADQ67643.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain A
sw_5_scaffold_1174_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5144..5953
DNA (810bp) protein (270aa)
Metal dependent phosphohydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFC1_9EURY
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EMA44033.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
metal dependent phosphohydrolase
sw_5_scaffold_1174_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6227..7372
DNA (1146bp) protein (382aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME56_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44037.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
multidrug ABC transporter ATPase
sw_5_scaffold_1174_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7580..8335
DNA (756bp) protein (252aa)
ABC transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA12_9EURY
ABC transporter {ECO:0000313|EMBL:EMA41464.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC-type transport system, permease protein
sw_5_scaffold_1174_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8548..9057
DNA (510bp) protein (170aa)
Periplasmic copper-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT76_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EFW91805.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
sw_5_scaffold_1174_trna_1
unknown

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comp(9374..9444)
DNA (71bp)
transferRNA
sw_5_scaffold_1174_11
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9582..10232)
DNA (651bp) protein (217aa)
Methyltransferase type 11 n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P052_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA62904.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21
methyltransferase type 11
sw_5_scaffold_1174_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10370..10780)
DNA (411bp) protein (137aa)
type II secretion system F domain-containing protein; K07333 archaeal flagellar protein FlaJ id=24613855 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Type II secretion system F domain-containing protein {ECO:0000313|EMBL:ESP89641.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum
hypothetical protein
sw_5_scaffold_1174_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10810..12462)
DNA (1653bp) protein (551aa)
Archaeal flagella assembly protein J n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WAA4_9EURY
archaeal flagella assembly protein J
Archaeal flagella assembly protein J {ECO:0000313|EMBL:AGN02609.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
sw_5_scaffold_1174_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12471..13751)
DNA (1281bp) protein (427aa)
Type II secretion system protein E n=3 Tax=Halobiforma lacisalsi RepID=M0LU47_9EURY
Type II secretion system protein E {ECO:0000313|EMBL:EMA35919.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi
type II secretion system protein E
Displaying 15 items

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