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sw_5_scaffold_1323

Search features with annotation key words

Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1323_1
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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187..1047
DNA (861bp) protein (287aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=797299 species="
NH(3)-dependent NAD(+) synthetase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XCZ6_9EURY
NAD synthetase
sw_5_scaffold_1323_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1141..1527)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JBR9_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16722.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_5_scaffold_1323_3
unknown

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comp(1627..2001)
DNA (375bp) protein (125aa)

This feature has no annotations

sw_5_scaffold_1323_4
unknown

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comp(1998..2300)
DNA (303bp) protein (101aa)

This feature has no annotations

sw_5_scaffold_1323_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2396..3406
DNA (1011bp) protein (337aa)
Replication factor C small subunit 2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N930_9EURY
Replication factor C small subunit 2 {ECO:0000313|EMBL:EMA53604.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
replication factor C small subunit 2
sw_5_scaffold_1323_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3527..5209
DNA (1683bp) protein (561aa)
Aldehyde ferredoxin oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JE04_9EURY
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:EJN57939.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
aldehyde:ferredoxin oxidoreductase
sw_5_scaffold_1323_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5279..6589)
DNA (1311bp) protein (437aa)
Amidase, hydantoinase/carbamoylase family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J414_HALJB
amidase, hydantoinase/carbamoylase family protein
Amidase, hydantoinase/carbamoylase family protein {ECO:0000313|EMBL:ADJ15406.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" sourc
sw_5_scaffold_1323_8
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6734..7108)
DNA (375bp) protein (125aa)
Uncharacterized protein n=8 Tax=Pseudomonas syringae pv. actinidiae RepID=S6KT32_PSESF
Uncharacterized protein {ECO:0000313|EMBL:EPM48715.1}; TaxID=1194422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" sou
sw_5_scaffold_1323_9
unknown

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7151..7447
DNA (297bp) protein (99aa)

This feature has no annotations

sw_5_scaffold_1323_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7379..8137)
DNA (759bp) protein (253aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4P9_9EURY
sw_5_scaffold_1323_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8134..8877)
DNA (744bp) protein (248aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA; proteasome alpha subunit (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJT1_9EURY
sw_5_scaffold_1323_12

Not on your lists

9000..10034
DNA (1035bp) protein (345aa)
uvsE; UV damage endonuclease (EC:3.-.-.-)
UV-damage endonuclease n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y6V2_9ARCH
UV-damage endonuclease {ECO:0000313|EMBL:ESS08491.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
sw_5_scaffold_1323_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10346..12199)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45331.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying 13 items

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