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sw_5_scaffold_1035

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1035_1
unknown

Not on your lists

1..87
DNA (87bp) protein (29aa)

This feature has no annotations

sw_5_scaffold_1035_2
Haloarcula sp. Ea4, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

206..1945
DNA (1740bp) protein (580aa)
Phosphoesterase PA-phosphatase-related protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YUX3_9EURY
GlnA {ECO:0000313|EMBL:AHZ89185.1}; Flags: Fragment;; TaxID=1480709 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. Ea4.;"
phosphoesterase PA-phosphatase-related protein
sw_5_scaffold_1035_3
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1842..2489)
DNA (648bp) protein (216aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356, ECO:0000313|EMBL:EMA05939.1}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacale
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I2K2_9EURY
sw_5_scaffold_1035_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2606..2782
DNA (177bp) protein (59aa)
Transcription regulator AsnC-type-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC83_9EURY
Transcription regulator AsnC-type-like protein {ECO:0000313|EMBL:EMA55183.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
transcriptional regulator
sw_5_scaffold_1035_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2779..3045
DNA (267bp) protein (89aa)
Transcription regulator AsnC-type-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC83_9EURY
Transcription regulator AsnC-type-like protein {ECO:0000313|EMBL:EMA55183.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
trh2; AsnC family transcriptional regulator
sw_5_scaffold_1035_6
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3149..4354
DNA (1206bp) protein (402aa)
cystathionine gamma-lyase (EC:4.4.1.1); K01758 cystathionine gamma-lyase [EC:4.4.1.1] Tax=RBG_16_Deltaproteobacteria_49_23_curated
Cystathionine synthase/lyase (Cystathionine gamma-synthase, cystathionine gamma-lyase, cystathionine beta-lyase) n=2 Tax=Halobacterium salinarum RepID=B0R464_HALS3
cgs; cystathionine gamma-synthase
sw_5_scaffold_1035_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4480..6399
DNA (1920bp) protein (640aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=797209 species="Archaea; Eury
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPH2_9EURY
sw_5_scaffold_1035_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6714..6863)
DNA (150bp) protein (50aa)
50S ribosomal protein L40e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M692_9EURY
50S ribosomal protein L40e {ECO:0000256|HAMAP-Rule:MF_00788}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
rpl40e; 50S ribosomal protein L40e
sw_5_scaffold_1035_9
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6964..7530)
DNA (567bp) protein (189aa)
Probable ribosome biogenesis protein MBE-HAL_1816 n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YFW5_9EURY
hypothetical protein
Probable ribosome biogenesis protein MBEHAL_1816 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeu
sw_5_scaffold_1035_10
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7616..7942
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E8Y1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42854.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_5_scaffold_1035_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8016..8654)
DNA (639bp) protein (213aa)
DSBA oxidoreductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M6B9_HALMO
DSBA oxidoreductase {ECO:0000313|EMBL:EMA41362.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
DSBA oxidoreductase
sw_5_scaffold_1035_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8774..9331
DNA (558bp) protein (186aa)
Serine acetyltransferase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6A6_HALJB
serine acetyltransferase
Serine acetyltransferase {ECO:0000313|EMBL:ADJ15824.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
sw_5_scaffold_1035_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9395..9823)
DNA (429bp) protein (143aa)
Deoxycytidine triphosphate deaminase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N680_9EURY
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:EMA52624.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
dCTP deaminase
sw_5_scaffold_1035_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9930..10358)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDQ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55688.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_1035_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10359..10919)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N163_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51712.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_1035_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11048..11884)
DNA (837bp) protein (279aa)
Oxidoreductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHV1_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA44918.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.
yusZ4; short chain dehydrogenase/reductase
sw_5_scaffold_1035_17
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12066..12818
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V727_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA27584.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
sw_5_scaffold_1035_18
unknown

Not on your lists

12883..13170
DNA (288bp) protein (96aa)

This feature has no annotations

sw_5_scaffold_1035_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13167..13604
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5T7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39979.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_1035_20
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13625..13849)
DNA (225bp) protein (75aa)
nfi; endonuclease V (deoxyinosine 3'endonuclease) (EC:3.1.21.7)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R2E8_HALMT
sw_5_scaffold_1035_21
unknown

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13941..14558
DNA (618bp) protein (206aa)

This feature has no annotations

Displaying 21 items

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