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sw_5_scaffold_1414

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1414_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..132
DNA (132bp) protein (44aa)
Glutaredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3JCS1_9EURY
Glutaredoxin {ECO:0000313|EMBL:EJN56861.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_1414_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(203..634)
DNA (432bp) protein (144aa)
Diadenosine tetraphosphate pyrophosphohydrolase n=2 Tax=Haloarcula RepID=M0JRC0_9EURY
biotin transporter BioY
Diadenosine tetraphosphate pyrophosphohydrolase {ECO:0000313|EMBL:EMA11692.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Halo
sw_5_scaffold_1414_3

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792..2210
DNA (1419bp) protein (473aa)
S-adenosylhomocysteine deaminase (EC:3.5.4.28)
S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:AEN05946.1}; EC=3.5.4.28 {ECO:0000313|EMBL:AEN05946.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
S-adenosylhomocysteine deaminase n=1 Tax=halophilic archaeon DL31 RepID=G2MG52_9ARCH
sw_5_scaffold_1414_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2269..2625)
DNA (357bp) protein (119aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
ctaB; protoheme IX geranylgeranyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHN1_9EURY
sw_5_scaffold_1414_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2622..3758)
DNA (1137bp) protein (379aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZZ5_9EURY
protoheme IX farnesyltransferase
sw_5_scaffold_1414_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3789..4817
DNA (1029bp) protein (343aa)
Cytochrome c oxidase subunit II n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFQ3_9EURY
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EMA44208.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
cytochrome c oxidase subunit II
sw_5_scaffold_1414_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4981..6885
DNA (1905bp) protein (635aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WXK5_9EURY
ATP-dependent DNA ligase i
sw_5_scaffold_1414_8
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6955..7971
DNA (1017bp) protein (339aa)
mRNA 3'-end processing factor n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWR2_9EURY
mRNA 3'-end processing factor {ECO:0000313|EMBL:ELY53919.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
hypothetical protein
sw_5_scaffold_1414_9
unknown

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8152..8316
DNA (165bp) protein (55aa)

This feature has no annotations

sw_5_scaffold_1414_trna_1
unknown

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comp(8585..8657)
DNA (73bp)
transferRNA
sw_5_scaffold_1414_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8826..9020
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCV3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54919.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_5_scaffold_1414_11
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9045..9332)
DNA (288bp) protein (96aa)
Putative DNA binding n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQN5_HALUD
DNA binding
Putative DNA binding {ECO:0000313|EMBL:ACV10494.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain
sw_5_scaffold_1414_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9452..10312
DNA (861bp) protein (287aa)
Cox-type terminal oxidase subunit III n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXZ8_9EURY
Cox-type terminal oxidase subunit III {ECO:0000313|EMBL:EMA49300.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
cytochrome c oxidase subunit III
sw_5_scaffold_1414_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10443..10676)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N849_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54016.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_1414_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10929..11438
DNA (510bp) protein (170aa)
MCM family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7L0_9EURY
MCM family protein {ECO:0000313|EMBL:EMA40584.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
cell division protein
Displaying 15 items

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