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sw_5_scaffold_1520

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1520_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
coxA; cox-type terminal oxidase subunit I (EC:1.9.3.-)
Cox-type terminal oxidase subunit I n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GXJ9_9EURY
Cox-type terminal oxidase subunit I {ECO:0000313|EMBL:ESP89876.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candi
sw_5_scaffold_1520_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(284..970)
DNA (687bp) protein (229aa)
coxA1; cox-type terminal oxidase subunit I (EC:1.9.3.1)
Cytochrome C oxidase subunit I n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVE0_9EURY
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:EMA49303.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
sw_5_scaffold_1520_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1235..1876
DNA (642bp) protein (214aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3X2_HALMD
Bacterio-opsin activator HTH domain-containing protein
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:ACV47794.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halom
sw_5_scaffold_1520_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2018..3367
DNA (1350bp) protein (450aa)
Levansucrase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DH53_9EURY
Levansucrase {ECO:0000313|EMBL:ELZ34027.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
Levansucrase
sw_5_scaffold_1520_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3476..5698)
DNA (2223bp) protein (741aa)
Sucrose-6-phosphate hydrolase n=1 Tax=Halogranum salarium B-1 RepID=J3EV78_9EURY
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EJN58472.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sucrose-6-phosphate hydrolase
sw_5_scaffold_1520_6
unknown

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6145..6399
DNA (255bp) protein (85aa)

This feature has no annotations

sw_5_scaffold_1520_7
unknown

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6448..7026
DNA (579bp) protein (193aa)

This feature has no annotations

sw_5_scaffold_1520_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6919..7437)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUA5_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48276.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_1520_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7537..8316)
DNA (780bp) protein (260aa)
Short-chain alcohol dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSQ6_HALMO
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:EMA48772.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhua
short-chain alcohol dehydrogenase
sw_5_scaffold_1520_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8466..9239
DNA (774bp) protein (258aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQG6_9EURY
Enoyl-CoA hydratase {ECO:0000313|EMBL:EMA47876.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
sw_5_scaffold_1520_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9264..9509)
DNA (246bp) protein (82aa)
Fe-S oxidoreductase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8E3_9EURY
Fe-S oxidoreductase {ECO:0000313|EMBL:EMA54131.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
hypothetical protein
sw_5_scaffold_1520_12
unknown

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9811..10080
DNA (270bp) protein (90aa)

This feature has no annotations

sw_5_scaffold_1520_13
unknown

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10332..10724
DNA (393bp) protein (131aa)

This feature has no annotations

sw_5_scaffold_1520_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10753..11409)
DNA (657bp) protein (219aa)
Beta-lactamase domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWX6_9EURY
Beta-lactamase domain protein {ECO:0000313|EMBL:EFW90779.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
beta-lactamase
sw_5_scaffold_1520_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11641..11919)
DNA (279bp) protein (93aa)
Putative sugar kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAI4_9EURY
Putative sugar kinase {ECO:0000313|EMBL:ELZ20306.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
hypothetical protein
sw_5_scaffold_1520_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12140..12520)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA54238.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_5_scaffold_1520_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12703..15237)
DNA (2535bp) protein (845aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1227456 species="Archaea; Euryarchae
DNA topoisomerase 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFC0_9EURY
DNA topoisomerase
sw_5_scaffold_1520_18
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15803..16072
DNA (270bp) protein (90aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FPN2_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELZ31735.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenqui
sw_5_scaffold_1520_19
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16120..16359)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NGB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE57545.1}; Flags: Fragment;; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnic
hypothetical protein
sw_5_scaffold_1520_20
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16550..18079)
DNA (1530bp) protein (510aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PKT7_9EURY
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
sw_5_scaffold_1520_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18249..18494)
DNA (246bp) protein (82aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME87_9EURY
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:EFW90432.1}; Flags: Fragment;; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.
alpha/beta hydrolase fold-3 domain protein
sw_5_scaffold_1520_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18582..18800)
DNA (219bp) protein (73aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZL00_9EURY
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:EJN61405.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.
alpha/beta hydrolase fold-3 domain-containing protein
Displaying 22 items

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