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sw_5_scaffold_153

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_153_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(446..1402)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDN6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55204.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
succinylglutamate desuccinylase/aspartoacylase
sw_5_scaffold_153_2
unknown

Not on your lists

1573..1827
DNA (255bp) protein (85aa)

This feature has no annotations

sw_5_scaffold_153_3
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1868..2320)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K600_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39960.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_5_scaffold_153_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2596..3408)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1U4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51846.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_153_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3499..4800)
DNA (1302bp) protein (434aa)
TrkA-C domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0I7_HALMD
TrkA-C domain-containing protein
TrkA-C domain protein {ECO:0000313|EMBL:ACV46969.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (s
sw_5_scaffold_153_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4945..5910)
DNA (966bp) protein (322aa)
ddh; 2-D-hydroxyacid dehydrogenase (EC:1.1.1.-)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DHY6_9EURY
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:ELZ35050.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
sw_5_scaffold_153_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6006..6377
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J734_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15987.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_5_scaffold_153_8
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6468..8285)
DNA (1818bp) protein (606aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTH5_HALBP
phenylalanyl-tRNA synthetase subunit beta
sw_5_scaffold_153_9
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8285..9796)
DNA (1512bp) protein (504aa)
Phenylalanyl-tRNA ligase subunit alpha {ECO:0000313|EMBL:EMA60216.1}; EC=6.1.1.20 {ECO:0000313|EMBL:EMA60216.1};; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferaca
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanyl-tRNA ligase subunit alpha n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NR18_9EURY
sw_5_scaffold_153_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10216..11940)
DNA (1725bp) protein (575aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1227455 species="Archaea
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBL5_9EURY
sw_5_scaffold_153_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12484..13020
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43171.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_153_12
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13062..13505
DNA (444bp) protein (148aa)
Trans-aconitate 2-methyltransferase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E7J4_9EURY
Trans-aconitate 2-methyltransferase {ECO:0000313|EMBL:ELZ42973.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
trans-aconitate 2-methyltransferase
sw_5_scaffold_153_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13499..13765
DNA (267bp) protein (89aa)
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERH10817.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
trans-aconitate 2-methyltransferase id=24646648 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
trans-aconitate 2-methyltransferase
sw_5_scaffold_153_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13775..14869)
DNA (1095bp) protein (365aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1132509 species="Archaea
endA; tRNA-splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M811_9EURY
sw_5_scaffold_153_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15031..15702
DNA (672bp) protein (224aa)
HAD superfamily hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBN2_9EURY
HAD superfamily hydrolase {ECO:0000313|EMBL:EMA43156.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
HAD-superfamily hydrolase
sw_5_scaffold_153_16
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16132..18513)
DNA (2382bp) protein (794aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3S3_HALJB
DEAD/DEAH box helicase {ECO:0000313|EMBL:AHG00568.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;
DEAD/DEAH box helicase
sw_5_scaffold_153_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18601..20019)
DNA (1419bp) protein (473aa)
MATE efflux family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXG1_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA49993.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
putative efflux protein, MATE family
sw_5_scaffold_153_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20172..21107
DNA (936bp) protein (312aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206, ECO:0000313|EMBL:ELZ31092.1};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO
Probable lipoyl synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D8S7_9EURY
lipoate synthase
sw_5_scaffold_153_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21357..22145
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0LTD7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36822.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_153_20
unknown

Not on your lists

22150..22521
DNA (372bp) protein (124aa)

This feature has no annotations

sw_5_scaffold_153_21
unknown

Not on your lists

comp(22690..22887)
DNA (198bp) protein (66aa)

This feature has no annotations

sw_5_scaffold_153_22
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23361..23993
DNA (633bp) protein (211aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit {ECO:0000313|EMBL:AEH35755.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEH35755.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobac
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6T8_HALXS
sw_5_scaffold_153_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23936..24343
DNA (408bp) protein (136aa)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBM7_9EURY
Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha {ECO:0000313|EMBL:EMA43151.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
pyruvate dehydrogenase E1 component subunit alpha
sw_5_scaffold_153_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24348..25385
DNA (1038bp) protein (346aa)
oxdhB; 2-oxoacid dehydrogenase E1 component, beta subunit (EC:1.2.4.-)
Transketolase central region n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFF1_9EURY
Transketolase central region {ECO:0000313|EMBL:EMA43150.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
sw_5_scaffold_153_25
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25385..25834
DNA (450bp) protein (150aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N656_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EMA53013.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
sw_5_scaffold_153_26
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25831..26262
DNA (432bp) protein (144aa)
branched-chain alpha-keto acid dehydrogenase subunit E2, partial n=1 Tax=Halobiforma lacisalsi RepID=UPI0002631757
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EMA33858.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="H
branched-chain alpha-keto acid dehydrogenase subunit E2
Displaying 26 items

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