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sw_5_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_229_1
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..216)
DNA (216bp) protein (72aa)
Histidine kinase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JEU5_9EURY
Histidine kinase {ECO:0000313|EMBL:EMA06888.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.;"
histidine kinase
sw_5_scaffold_229_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(367..1386)
DNA (1020bp) protein (340aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKR1_9EURY
sw_5_scaffold_229_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1515..2165
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MKX1_HALMO
sw_5_scaffold_229_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2331..3299
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23468.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_229_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3418..3993
DNA (576bp) protein (192aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
Cytidylate kinase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LT53_9EURY
cytidylate kinase
sw_5_scaffold_229_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3997..5163
DNA (1167bp) protein (389aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Halonotius sp. J07HN6 RepID=U1NTL6_9EURY
H/ACA RNA-protein complex component Cbf5p
sw_5_scaffold_229_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5192..5545)
DNA (354bp) protein (118aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDL1_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EMA42475.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
potassium efflux system KefA protein / small-conductance mechanosensitive channel
sw_5_scaffold_229_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5542..6147)
DNA (606bp) protein (202aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDL1_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EMA42475.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
small-conductance mechanosensitive channel
sw_5_scaffold_229_trna_1
unknown

Not on your lists

6315..6387
DNA (73bp)
transferRNA
sw_5_scaffold_229_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6523..7272)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1P262_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10755.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_5_scaffold_229_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7396..8073
DNA (678bp) protein (226aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWW2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW90765.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
sw_5_scaffold_229_11
unknown

Not on your lists

8128..8385
DNA (258bp) protein (86aa)

This feature has no annotations

sw_5_scaffold_229_12
unknown

Not on your lists

8389..8526
DNA (138bp) protein (46aa)

This feature has no annotations

sw_5_scaffold_229_13

Not on your lists

comp(8616..10391)
DNA (1776bp) protein (592aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=756883 species="Archaea.;" source="halo
dihydroxy-acid dehydratase n=1 Tax=Halarchaeum acidiphilum RepID=UPI000372E297
sw_5_scaffold_229_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10613..11719
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Haladaptatus paucihalophilus RepID=UPI000378E968
Uncharacterized protein {ECO:0000313|EMBL:EFW93436.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_229_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11759..13345)
DNA (1587bp) protein (529aa)
Formate/nitrite transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYS4_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:EMA50882.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
hypothetical protein
sw_5_scaffold_229_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13530..14504
DNA (975bp) protein (325aa)
Beta-ribofuranosylaminobenzene 5'-phosphate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFC0_9EURY
Beta-ribofuranosylaminobenzene 5'-phosphate synthase {ECO:0000313|EMBL:EMA44432.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
beta-RFAP synthase
sw_5_scaffold_229_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14659..15363
DNA (705bp) protein (235aa)
Homolog to KaiC-like transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT39_NATM8
homolog to KaiC-like transcription regulator
Uncharacterized protein {ECO:0000313|EMBL:CCQ37567.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_229_18
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15509..15793
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3C1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15228.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_5_scaffold_229_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16267..16587
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5B6_9EURY
tfs2; transcription elongation factor TFS
sw_5_scaffold_229_20
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16734..19457
DNA (2724bp) protein (908aa)
Phosphoenolpyruvate carboxylase {ECO:0000313|EMBL:ADD04060.1}; EC=4.1.1.31 {ECO:0000313|EMBL:ADD04060.1};; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natr
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SY20_NATMM
sw_5_scaffold_229_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19473..20138
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME04_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43976.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
Uncharacterized protein family (UPF0153)
sw_5_scaffold_229_22
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20335..20637
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTT9_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10928.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_5_scaffold_229_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20979..22340)
DNA (1362bp) protein (454aa)
Cytochrome P450 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQM1_NATM8
cyc1; cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:CCQ36470.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain D
sw_5_scaffold_229_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22550..23230
DNA (681bp) protein (227aa)
PyrE-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSQ0_9EURY
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6
orotate phosphoribosyltransferase-like protein
sw_5_scaffold_229_25
unknown

Not on your lists

23408..23875
DNA (468bp) protein (156aa)

This feature has no annotations

sw_5_scaffold_229_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23914..24822)
DNA (909bp) protein (303aa)
Dihydrodipicolinate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI08_9EURY
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EMA44973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
dihydrodipicolinate synthase
sw_5_scaffold_229_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25158..25769
DNA (612bp) protein (204aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
Superoxide dismutase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM71_9EURY
Superoxide dismutase
sw_5_scaffold_229_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25891..26850
DNA (960bp) protein (320aa)
PfkB domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6Z0_9EURY
PfkB domain-containing protein {ECO:0000313|EMBL:EMA53697.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
sugar kinase, ribokinase
sw_5_scaffold_229_29
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26892..28112)
DNA (1221bp) protein (407aa)
NADH dehydrogenase, fad-containing subunit n=1 Tax=Halogranum salarium B-1 RepID=J3JFQ5_9EURY
NADH dehydrogenase, fad-containing subunit {ECO:0000313|EMBL:EJN59459.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.
NADH dehydrogenase
Displaying items 1-30 of 38 in total

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