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sw_5_scaffold_500

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_500_1
unknown

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2..85
DNA (84bp) protein (28aa)

This feature has no annotations

sw_5_scaffold_500_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

543..2561
DNA (2019bp) protein (673aa)
Aldo/keto reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CX55_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ26997.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
aldo/keto reductase
sw_5_scaffold_500_3
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2588..3538)
DNA (951bp) protein (317aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:ELY77483.1}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:ELY77483.1};; SAI
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Natrinema gari JCM 14663 RepID=L9YX55_9EURY
sw_5_scaffold_500_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3641..5116
DNA (1476bp) protein (492aa)
FO synthase subunit 2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N781_9EURY
FO synthase subunit 2 {ECO:0000313|EMBL:EMA52979.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
FO synthase subunit 2
sw_5_scaffold_500_5
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5479..6684)
DNA (1206bp) protein (402aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
FO synthase subunit 1 n=1 Tax=Halobacterium sp. DL1 RepID=G4IEX3_9EURY
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
sw_5_scaffold_500_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7081..7737)
DNA (657bp) protein (219aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=122745
2-phospho-L-lactate guanylyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N532_9EURY
phospholactate guanylyltransferase
sw_5_scaffold_500_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7832..8719)
DNA (888bp) protein (296aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLX1_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA46656.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
NAD-dependent epimerase/dehydratase
sw_5_scaffold_500_8
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8927..9520
DNA (594bp) protein (198aa)
tmk; thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=795797 species="Archaea; Euryarchaeot
Probable thymidylate kinase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9H0_HALJB
sw_5_scaffold_500_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9610..9927)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLT8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46652.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_500_10
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10165..10395)
DNA (231bp) protein (77aa)
Transcriptional regulator n=1 Tax=Natronococcus occultus SP4 RepID=L0JW63_9EURY
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB36319.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_5_scaffold_500_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10598..11293
DNA (696bp) protein (232aa)
TrkA-N domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VUK2_HALJB
TrkA-N domain-containing protein {ECO:0000313|EMBL:ELY40652.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccu
TrkA-N domain-containing protein
sw_5_scaffold_500_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11295..11525
DNA (231bp) protein (77aa)
AsnC family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9I0_HALJB
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELY40653.1}; Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ADJ14392.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobac
sw_5_scaffold_500_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11612..12205)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQI3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ04870.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_5_scaffold_500_14
unknown

Not on your lists

comp(12332..12529)
DNA (198bp) protein (66aa)

This feature has no annotations

sw_5_scaffold_500_15
unknown

Not on your lists

comp(12746..13048)
DNA (303bp) protein (101aa)

This feature has no annotations

sw_5_scaffold_500_16
unknown

Not on your lists

comp(13052..13279)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_5_scaffold_500_17
unknown

Not on your lists

13727..14080
DNA (354bp) protein (118aa)

This feature has no annotations

sw_5_scaffold_500_18
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14335..14844)
DNA (510bp) protein (170aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000313|EMBL:AEH36502.1}; EC=5.2.1.8 {ECO:0000313|EMBL:AEH36502.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;"
Peptidylprolyl isomerase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D5S7_HALXS
sw_5_scaffold_500_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14956..15438)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHC8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44753.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_500_20
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15814..17730
DNA (1917bp) protein (639aa)
mRNA 3-end processing factor-like protein n=2 Tax=Haloferax RepID=M0I9I9_9EURY
mRNA 3-end processing factor-like protein {ECO:0000313|EMBL:ELZ92697.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfu
epf1; mRNA 3-end processing factor-like protein
sw_5_scaffold_500_21
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18100..18465
DNA (366bp) protein (122aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3AAY8_9EURY
Methylglyoxal synthase {ECO:0000313|EMBL:GAD51928.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sw_5_scaffold_500_22
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18508..18621)
DNA (114bp) protein (38aa)
HhH-GPD family protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7R0_HALXS
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:AEH35508.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18
Displaying 22 items

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