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sw_5_scaffold_610

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_610_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..134)
DNA (132bp) protein (44aa)
Putative transcriptional regulator n=1 Tax=Halogranum salarium B-1 RepID=J3JEH5_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:EJN58371.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative transcriptional regulator
sw_5_scaffold_610_2
unknown

Not on your lists

405..524
DNA (120bp) protein (40aa)

This feature has no annotations

sw_5_scaffold_610_3

Not on your lists

609..1094
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2ML94_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05571.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_610_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2182..2502
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JH50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60681.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_5_scaffold_610_5
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2771..2962
DNA (192bp) protein (64aa)
50S ribosomal protein L18Ae n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=RL18A_HALUD
rplX; 50S ribosomal protein LX
50S ribosomal protein L18Ae {ECO:0000255|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000255|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000255|HAMAP-Rule:MF_00273}; TaxID=519442 sp
sw_5_scaffold_610_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2959..3450
DNA (492bp) protein (164aa)
prefoldin, subunit alpha; K04797 prefoldin alpha subunit id=24616519 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
pfdA; prefoldin subunit alpha
sw_5_scaffold_610_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3466..4710
DNA (1245bp) protein (415aa)
Signal recognition particle receptor FtsY n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAH5_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobac
ftsY; signal recognition particle receptor SRalpha
sw_5_scaffold_610_8
Eimeria praecox, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

4880..5593
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Eimeria praecox RepID=U6H855_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDI86899.1}; TaxID=51316 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeri
hypothetical protein
sw_5_scaffold_610_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5796..8036
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N821_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54082.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
pbs lyase heat-like hypothetical protein
sw_5_scaffold_610_10
Toxoplasma gondii, Toxoplasma, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

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8193..8918
DNA (726bp) protein (242aa)
PREDICTED: sodium/potassium/calcium exchanger 1 n=1 Tax=Sarcophilus harrisii RepID=UPI0002738E5A
WW domain protein {ECO:0000313|EMBL:KFH17684.1}; TaxID=943118 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma.;" source="Toxop
hypothetical protein
sw_5_scaffold_610_11
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9039..9437
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R7H1_HALS3
DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CAP14690.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (
sw_5_scaffold_610_12
unknown

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9657..10130
DNA (474bp) protein (158aa)
ATPase AAA
sw_5_scaffold_610_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10262..10534)
DNA (273bp) protein (91aa)
Gas vesicle structural protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGP7_9EURY
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
gvpM1; gas-vesicle operon protein gvpM1
sw_5_scaffold_610_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10531..11484)
DNA (954bp) protein (318aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MVW5_HALMO
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:EMA49751.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae D
Gas vesicle synthesis GvpLGvpF
sw_5_scaffold_610_15
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11477..11809)
DNA (333bp) protein (111aa)
Gas vesicle K n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z3Y6_9EURY
Gas vesicle K {ECO:0000313|EMBL:ELY79893.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
Gas vesicle protein K
sw_5_scaffold_610_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11806..12540)
DNA (735bp) protein (245aa)
Gas vesicle structural protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N825_9EURY
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailan
gas vesicle protein GVPa
sw_5_scaffold_610_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12533..13570)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N951_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54088.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_610_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13567..14151)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ12_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46535.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_5_scaffold_610_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14151..14405)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MP92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51009.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_610_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14402..15034)
DNA (633bp) protein (211aa)
Gas vesicle synthesis protein GvpLGvpF n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0F0_9EURY
Gas vesicle synthesis protein GvpLGvpF {ECO:0000313|EMBL:EMA51008.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
gvpF; gas-vesicle operon protein gvpF
sw_5_scaffold_610_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15218..15562
DNA (345bp) protein (115aa)
Gas vesicle structural protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZ76_9EURY
Gas vesicle structural protein {ECO:0000256|HAMAP-Rule:MF_00576, ECO:0000256|RuleBase:RU000632}; Short=GVP {ECO:0000256|HAMAP-Rule:MF_00576};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacter
gas vesicle protein GvpA
sw_5_scaffold_610_22
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15728..16945
DNA (1218bp) protein (406aa)
Gas vesicle synthesis family protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A8F0_9EURY
Gas vesicle synthesis family protein {ECO:0000313|EMBL:ELY95025.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeiren
gas vesicle synthesis family protein
sw_5_scaffold_610_23
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16990..17340)
DNA (351bp) protein (117aa)
Formate/nitrite transporter n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NLC3_9EURY
Formate transporter {ECO:0000313|EMBL:KKF40054.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
formate/nitrite transporter
sw_5_scaffold_610_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18013..18549
DNA (537bp) protein (179aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M542_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA40826.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane-bound metal-dependent hydrolase
sw_5_scaffold_610_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18663..18827
DNA (165bp) protein (55aa)
Signal recognition particle 54 kDa protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE7_9EURY
GTP-binding signal recognition particle SRP54 G-domain protein
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Displaying 25 items

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