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sw_5_scaffold_672

Search features with annotation key words

Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_672_1
unknown

Not on your lists

575..829
DNA (255bp) protein (85aa)

This feature has no annotations

sw_5_scaffold_672_2
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1053..1484
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JYX3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37505.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_5_scaffold_672_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1486..2544
DNA (1059bp) protein (353aa)
Integrase family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ13_9EURY
Integrase family protein {ECO:0000313|EMBL:EFW90429.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
integrase family protein
sw_5_scaffold_672_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2783..4117)
DNA (1335bp) protein (445aa)
Flavin-dependent pyridine nucleotide oxidoreductase (Homolog to coenzyme A disulfide reductase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS98_NATM8
flavin-dependent pyridine nucleotide oxidoreductase (homolog to coenzyme A disulfide reductase)
Flavin-dependent pyridine nucleotide oxidoreductase (Homolog to coenzyme A disulfide reductase) {ECO:0000313|EMBL:CCQ37223.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
sw_5_scaffold_672_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4364..5107)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2K4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14961.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_5_scaffold_672_6
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5194..6135
DNA (942bp) protein (314aa)
Glycosyl hydrolase BNR repeat-containing protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S2Y5_HALTV
glycosyl hydrolase
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:ADB63732.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Halote
sw_5_scaffold_672_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6214..6405
DNA (192bp) protein (64aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XHX6_9EURY
thioredoxin reductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ELY60278.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" sou
sw_5_scaffold_672_8
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6599..8242)
DNA (1644bp) protein (548aa)
speE; spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R191_HALMT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=52
sw_5_scaffold_672_9
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8439..9731
DNA (1293bp) protein (431aa)
nucleotide sugar dehydrogenase (EC:1.1.1.132)
GDP-mannose 6-dehydrogenase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ADR0_9BACE
GDP-mannose 6-dehydrogenase {ECO:0000313|EMBL:CDA49145.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bac
sw_5_scaffold_672_10
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(9811..11079)
DNA (1269bp) protein (423aa)
Glycosyl transferase group 1 n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DZD9_DICTD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACK41872.1}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 /
sw_5_scaffold_672_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11390..12505)
DNA (1116bp) protein (372aa)
cellulase (EC:3.2.1.4)
Peptidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY40_9EURY
Peptidase {ECO:0000313|EMBL:EMA50642.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
sw_5_scaffold_672_12
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12540..12869)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZRN1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY88746.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
sw_5_scaffold_672_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12876..13292)
DNA (417bp) protein (139aa)
Prefoldin subunit beta n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N815_9EURY
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
prefoldin subunit beta
sw_5_scaffold_672_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13400..13669)
DNA (270bp) protein (90aa)
KEOPS complex Pcc1-like subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC53_9EURY
KEOPS complex Pcc1-like subunit {ECO:0000313|EMBL:EMA55431.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
rpo operon protein
sw_5_scaffold_672_15
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13726..13860)
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit P {ECO:0000313|EMBL:ELZ44440.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ44440.1};; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
DNA-directed RNA polymerase subunit P n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E9J5_9EURY
DNA-directed RNA polymerase subunit P
sw_5_scaffold_672_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13894..14166)
DNA (273bp) protein (91aa)
50S ribosomal protein L37Ae n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSL6_HALBP
50S ribosomal protein L37ae
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
sw_5_scaffold_672_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14254..14973)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20225.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_672_18
unknown

Not on your lists

comp(15070..15354)
DNA (285bp) protein (95aa)

This feature has no annotations

sw_5_scaffold_672_19
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15512..16960)
DNA (1449bp) protein (483aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XFW3_9EURY
tRNA pseudouridine synthase D
sw_5_scaffold_672_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17187..17579
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5A6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52738.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_672_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17633..17971)
DNA (339bp) protein (113aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:ESP89680.1}; EC=3.1.1.29 {ECO:0000313|EMBL:ESP89680.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candi
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HG37_9EURY
sw_5_scaffold_672_22
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18121..18855
DNA (735bp) protein (245aa)
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL
Probable deoxycytidine triphosphate deaminase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BRV5_9EURY
deoxycytidine triphosphate deaminase
sw_5_scaffold_672_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18852..19757
DNA (906bp) protein (302aa)
Phosphomethylpyrimidine kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQH0_9EURY
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EMA46725.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
hypothetical protein
sw_5_scaffold_672_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19764..20477
DNA (714bp) protein (238aa)
Methyltransferase type 11 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM33_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA46726.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
methylase involved in ubiquinone/menaquinone biosynthesis
sw_5_scaffold_672_25
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20621..21007)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BS77_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ13800.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_5_scaffold_672_26
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21004..22200)
DNA (1197bp) protein (399aa)
acaB; acetyl-CoA C-acyltransferase (EC:2.3.1.16)
Acetyl-CoA C-acetyltransferase n=2 Tax=Halobacterium salinarum RepID=B0R3X4_HALS3
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:AAG19170.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_5_scaffold_672_27
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22455..23237)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LL37_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33144.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_5_scaffold_672_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23265..24284
DNA (1020bp) protein (340aa)
SagB-type dehydrogenase domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCB7_9EURY
SagB-type dehydrogenase domain protein {ECO:0000313|EMBL:ELZ20288.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
SagB-type dehydrogenase domain
sw_5_scaffold_672_29
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24242..24502
DNA (261bp) protein (87aa)
SagB-type dehydrogenase domain n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NW62_HALBP
SagB-type dehydrogenase domain
SagB-type dehydrogenase domain {ECO:0000313|EMBL:ADQ69282.1}; SagB-type dehydrogenase domain protein {ECO:0000313|EMBL:ELY31766.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Halofera
sw_5_scaffold_672_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24568..25374)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5F5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52788.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
Displaying items 1-30 of 38 in total

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