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sw_5_scaffold_692

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_692_1
unknown

Not on your lists

3..530
DNA (528bp) protein (176aa)

This feature has no annotations

sw_5_scaffold_692_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(478..738)
DNA (261bp) protein (87aa)
Uncharacterized protein id=24616040 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88011.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
sw_5_scaffold_692_3
unknown

Not on your lists

861..1034
DNA (174bp) protein (58aa)

This feature has no annotations

sw_5_scaffold_692_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1006..1329
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N290_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51981.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_692_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1316..1705
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N212_9EURY
putative nucleic acid-binding protein, contains PIN domain
sw_5_scaffold_692_6
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1812..2681)
DNA (870bp) protein (290aa)
sucD; succinate--CoA ligase, alpha subunit (ADP-forming) (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales;
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R7E4_HALMT
sw_5_scaffold_692_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2678..3823)
DNA (1146bp) protein (382aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N3Z2_9EURY
sw_5_scaffold_692_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4034..4801
DNA (768bp) protein (256aa)
Alcohol dehydrogenase GroES domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNU9_9EURY
Alcohol dehydrogenase GroES domain-containing protein {ECO:0000313|EMBL:EMA46115.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
alcohol dehydrogenase GroES domain-containing protein
sw_5_scaffold_692_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4853..5485)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A4D3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60313.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
uracil DNA glycosylase
sw_5_scaffold_692_10
unknown

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comp(5608..5865)
DNA (258bp) protein (86aa)

This feature has no annotations

sw_5_scaffold_692_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6050..6325
DNA (276bp) protein (92aa)
Acylphosphatase {ECO:0000313|EMBL:EMA44461.1}; EC=3.6.1.7 {ECO:0000313|EMBL:EMA44461.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
acylphosphatase (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFI5_9EURY
sw_5_scaffold_692_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6397..7815
DNA (1419bp) protein (473aa)
Carbohydrate kinase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXK2_9EURY
Carbohydrate kinase {ECO:0000313|EMBL:EMA50336.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
yjeF-like protein, hydroxyethylthiazole kinase-related protein
sw_5_scaffold_692_13
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7812..8408
DNA (597bp) protein (199aa)
Probable cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RVC8_HALTV
molybdenum cofactor biosynthesis protein C
Probable cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=543526 spec
sw_5_scaffold_692_14

Not on your lists

comp(8665..9045)
DNA (381bp) protein (127aa)
Molecular chaperone, small heat shock protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y0T5_9ARCH
Molecular chaperone, small heat shock protein {ECO:0000313|EMBL:ESS06181.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
molecular chaperone
sw_5_scaffold_692_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9383..10111)
DNA (729bp) protein (243aa)
GTPase HflX n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRH7_9EURY
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
GTP-binding proten HflX
sw_5_scaffold_692_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10080..10577)
DNA (498bp) protein (166aa)
GTPase HflX n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3C5_NATM8
hflX; GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
sw_5_scaffold_692_17
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10783..11856)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WM83_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50487.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_5_scaffold_692_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11927..12652)
DNA (726bp) protein (242aa)
RNA-associated protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNW7_9EURY
RNA-associated protein {ECO:0000313|EMBL:EMA47038.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus D
Ribosome maturation protein SBDS-like protein
sw_5_scaffold_692_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12727..12909)
DNA (183bp) protein (61aa)
HEPN domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NHR1_9EURY
HEPN domain-containing protein {ECO:0000313|EMBL:EMA56649.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
sw_5_scaffold_692_20

Not on your lists

comp(12919..13092)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XU91_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05763.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_5_scaffold_692_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13085..13423)
DNA (339bp) protein (113aa)
Nucleotidyltransferase, putative n=1 Tax=Halococcus hamelinensis RepID=UPI00029AAF4A
Uncharacterized protein {ECO:0000313|EMBL:EJN57372.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_5_scaffold_692_22
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13643..14416)
DNA (774bp) protein (258aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=2 Tax=Haloarcula hispanica RepID=G0HTX1_HALHT
sw_5_scaffold_692_23
unknown

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comp(14422..14565)
DNA (144bp) protein (48aa)

This feature has no annotations

sw_5_scaffold_692_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14992..15744)
DNA (753bp) protein (251aa)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M9U8_HALMO
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:EMA42118.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
protein-L-isoaspartate O-methyltransferase
sw_5_scaffold_692_25
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15728..16465)
DNA (738bp) protein (246aa)
Ribonuclease P protein component 3 {ECO:0000256|HAMAP-Rule:MF_00756}; Short=RNase P component 3 {ECO:0000256|HAMAP-Rule:MF_00756};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00756};; Rpp30 {ECO:0000256|H
Ribonuclease P protein component 3 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M8I6_HALMO
Ribonuclease P
sw_5_scaffold_692_26
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16531..16956)
DNA (426bp) protein (142aa)
Putative exosome subunit n=3 Tax=Archaea RepID=U1NXF7_9EURY
Putative exosome subunit {ECO:0000313|EMBL:ERH02159.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
Displaying 26 items

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