ggKbase home page

sw_5_scaffold_73

Search features with annotation key words

Displaying 30 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_73_1
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..1375)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8V4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AGN00964.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
hypothetical protein
sw_5_scaffold_73_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1526..1786
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W6N0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02422.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_5_scaffold_73_3
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1840..3978
DNA (2139bp) protein (713aa)
DNA-binding protein MutS2 n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JFK5_NATP1
mismatch repair ATPase (MutS family)
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain
sw_5_scaffold_73_4
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4081..5199
DNA (1119bp) protein (373aa)
ORC1-type DNA replication protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P7L8_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aiding
cdc6; cell division control protein 6
sw_5_scaffold_73_5
unknown

Not on your lists

comp(5258..5569)
DNA (312bp) protein (104aa)

This feature has no annotations

sw_5_scaffold_73_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5764..6642)
DNA (879bp) protein (293aa)
Amidohydrolase 2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVZ9_9EURY
Amidohydrolase 2 {ECO:0000313|EMBL:EFW91412.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX25
amidohydrolase 2
sw_5_scaffold_73_7
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6721..7506)
DNA (786bp) protein (262aa)
Bacteriorhodopsin n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IDG5_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ELZ94097.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
bacteriorhodopsin
sw_5_scaffold_73_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7808..8452
DNA (645bp) protein (215aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44780.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
DNA binding protein
sw_5_scaffold_73_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8598..9263)
DNA (666bp) protein (222aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW86_9EURY
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:EFW91220.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Halada
DNA binding domain-containing protein
sw_5_scaffold_73_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10234..11016)
DNA (783bp) protein (261aa)
3'-5' exonuclease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHU7_9EURY
3'-5' exonuclease {ECO:0000313|EMBL:EMA45276.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
hypothetical protein
sw_5_scaffold_73_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11202..12338
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45322.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_73_12
Equid herpesvirus 8, Varicellovirus, Herpesvirales, Viruses

Not on your lists

12335..13327
DNA (993bp) protein (331aa)
Envelope glycoprotein J n=1 Tax=Equid herpesvirus 8 RepID=I1V8I5_9ALPH
Envelope glycoprotein J {ECO:0000313|EMBL:AFI33207.1}; TaxID=39637 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.;" source="Equid herp
baaA1; trimeric autotransporter adhesin
sw_5_scaffold_73_13
unknown

Not on your lists

13577..13768
DNA (192bp) protein (64aa)

This feature has no annotations

sw_5_scaffold_73_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13854..14957
DNA (1104bp) protein (368aa)
Cysteine desulfurase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MLI2_HALMO
Cysteine desulfurase {ECO:0000313|EMBL:EMA45584.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
class V aminotransferase
sw_5_scaffold_73_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15074..15781)
DNA (708bp) protein (236aa)
Halocyanin-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5X4_9EURY
Halocyanin-like protein {ECO:0000313|EMBL:EMA39999.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hcp4; halocyanin precursor-like
sw_5_scaffold_73_16
unknown

Not on your lists

comp(15930..17114)
DNA (1185bp) protein (395aa)

This feature has no annotations

sw_5_scaffold_73_17
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(17666..19153)
DNA (1488bp) protein (496aa)
Ig domain protein group 1 domain protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TU55_9CYAN
Ig domain-containing protein group 1 domain-containing protein
Ig domain protein group 1 domain protein {ECO:0000313|EMBL:AFY86352.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203
sw_5_scaffold_73_trna_1
unknown

Not on your lists

comp(19338..19412)
DNA (75bp)
transferRNA
sw_5_scaffold_73_18
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19526..20701)
DNA (1176bp) protein (392aa)
Membrane protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JK10_NATP1
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ELY73184.1}; Uncharacterized protein {ECO:0000313|EMBL:AGB31614.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natr
sw_5_scaffold_73_19
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20824..21537)
DNA (714bp) protein (238aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
thyX; thymidylate synthase ThyX (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JRU9_HALVA
sw_5_scaffold_73_20
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21674..22249
DNA (576bp) protein (192aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Natronococcus occultus SP4 RepID=L0JZP4_9EURY
Zn-dependent hydrolase, glyoxylase
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AGB37574.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occult
sw_5_scaffold_73_21
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22332..23141)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRT9_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV13044.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_5_scaffold_73_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23138..23401)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX24_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50131.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_73_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23602..25161
DNA (1560bp) protein (520aa)
Thermosome subunit 3 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBZ1_9EURY
Thermosome subunit 3 {ECO:0000313|EMBL:EMA43292.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
ths3; thermosome subunit 3
sw_5_scaffold_73_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25303..25755)
DNA (453bp) protein (151aa)
FMN-binding domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITX2_NATPD
hypothetical protein
FMN-binding domain protein {ECO:0000313|EMBL:CAI48411.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
sw_5_scaffold_73_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25807..26664)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWU2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38027.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_73_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26749..27480)
DNA (732bp) protein (244aa)
NAD operon protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFT8_9EURY
NAD operon protein {ECO:0000313|EMBL:EMA43295.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5
hypothetical protein
sw_5_scaffold_73_27
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27532..27972)
DNA (441bp) protein (147aa)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; EC=2.7.7.1 {ECO:0000256|HAMAP-Rule:MF_00243};; NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NAD(+) pyrophosp
nadR; nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K7M8_9EURY
sw_5_scaffold_73_28
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28254..30323
DNA (2070bp) protein (690aa)
ATP-dependent protease Lon (EC:3.4.21.53)
ATP-dependent protease Lon n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBU2_9EURY
ATP-dependent protease Lon {ECO:0000313|EMBL:EMA51669.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1
sw_5_scaffold_73_29
unknown

Not on your lists

30326..30565
DNA (240bp) protein (80aa)

This feature has no annotations

Displaying 30 items

View Taxonomy