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sw_5_scaffold_778

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_778_1
unknown

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)

This feature has no annotations

sw_5_scaffold_778_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(164..1888)
DNA (1725bp) protein (575aa)
Membrane protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCT2_HALMO
Membrane protein {ECO:0000313|EMBL:EMA42215.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
hypothetical protein
sw_5_scaffold_778_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1890..3830)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M8Z5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42216.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_5_scaffold_778_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3998..4546
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWK8_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48218.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_778_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4554..5114
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DL70_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34904.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_5_scaffold_778_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5115..5312
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N135_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50819.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_5_scaffold_778_trna_1
unknown

Not on your lists

comp(5424..5498)
DNA (75bp)
transferRNA
sw_5_scaffold_778_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5612..6484)
DNA (873bp) protein (291aa)
glycosyl tranferase; dolichyl-phosphate beta-glucosyltransferase (EC:2.4.1.117) id=24627696 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
gtl3; probable glycosyltransferase, type 2 (EC:2.4.-.-)
Uncharacterized protein {ECO:0000313|EMBL:ERG90446.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
sw_5_scaffold_778_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6613..7716
DNA (1104bp) protein (368aa)
Uncharacterized protein n=4 Tax=Halococcus hamelinensis RepID=M0LST1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36607.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_778_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7659..9059
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPH8_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA46370.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
conserved hypothetical membrane protein (DUF2298)
sw_5_scaffold_778_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9095..9820)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYK2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90268.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_778_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9924..10589)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4V8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52149.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_778_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10594..11115)
DNA (522bp) protein (174aa)
Transcription factor E n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N635_9EURY
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
transcription initiation factor IIE, alpha subunit
sw_5_scaffold_778_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11387..11905
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUI0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92259.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_5_scaffold_778_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12005..12601
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60891.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
phosphinothricin N-acetyltransferase
sw_5_scaffold_778_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12646..13185)
DNA (540bp) protein (180aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PN21_9EURY
tRNA cytosine methylase Pos56
sw_5_scaffold_778_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13274..14206
DNA (933bp) protein (311aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPV8_NATM8
NAD-dependent epimerase/dehydratase
GalE family epimerase/dehydratase {ECO:0000313|EMBL:CCQ36131.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
sw_5_scaffold_778_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14353..15045
DNA (693bp) protein (231aa)
DnaJ N-terminal domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFA5_9EURY
DnaJ N-terminal domain-containing protein {ECO:0000313|EMBL:EMA56496.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
DnaJ N-terminal domain-containing protein
sw_5_scaffold_778_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15110..15472)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N456_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52722.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_778_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15680..16393
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24334.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_778_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16858..17295
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRR3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36166.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_778_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17389..17685
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5H8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51940.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_5_scaffold_778_22
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17717..18148
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K553_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39243.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_5_scaffold_778_23
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18199..18603)
DNA (405bp) protein (135aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQV3_9EURY
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EFW93367.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sou
dppF; dipeptide ABC transporter ATP-binding protein
sw_5_scaffold_778_24

Not on your lists

comp(18897..19328)
DNA (432bp) protein (144aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEN04497.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AEN04497.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MFU8_9ARCH
sw_5_scaffold_778_25
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19335..19709)
DNA (375bp) protein (125aa)
Putative dipeptides/oligopeptides ABC transporter ATP-binding protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HAD1_9EURY
Putative dipeptides/oligopeptides ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ80682.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofer
dppD; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I
Displaying 26 items

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