ggKbase home page

sw_5_scaffold_138_10

Organism: SW_5_Halobacteriales_65_19

near complete RP 34 / 55 MC: 6 BSCG 25 / 51 MC: 2 ASCG 36 / 38
Location: comp(7903..8886)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRM9_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 309.0
  • Bit_score: 530
  • Evalue 1.50e-147
tfbA_3; transcription initiation factor TFB 3 similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 309.0
  • Bit_score: 530
  • Evalue 4.30e-148
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 309.0
  • Bit_score: 530
  • Evalue 2.10e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 984
ATGAAAAGAACGGACACACGAACGCGAACGCGGGTCTCGAAAGAGCAGCGCGAGACCGAATCCGAGACGAACGAGGAGCGCAACACGCTCGATTGCCCGGAGTGTGGCGGGAAGGTCATCGCCGACGGTGGTCACGGCGAGACGGTCTGTGCGGACTGCGGGCTCGTTATCGCTGAAAACGAGATCGATCGCGGCCCGGAGTGGCGCGCGTTCGATTCCCAGGAAAAAAACCAGAAATCGAGGGTGGGAGCGCCGACTACGAAGATGATGCACGACAAAGGCCTCTCTACCAACATCGACTGGCGCGATAAGGACGCCTACGGTCGGTCGCTCGACTCGCGCCAGCGCGCGAAGATGCAACGGCTCCGGAAGTGGAACGAGCGCTTCCGGACTCGGGACTCGAAGGATCGCAATCTCAAACAGGCTCTGGGCGAGATCGACCGGATGGCAAGTGCCCTGGGCCTACCCGAGACGGTCAGAGAGACCGCGAGCGTGATCTACCGTCGTGCGCTCGACGAGAACCTGCTTCCCGGGCGCTCGATCGAGGGGGTCTCGACGTCTGCGGTCTACGCTGCCGCGCGTCAGGCCGGCGTGCCTCGCAGCTTAGATGAGATCACCGAGGTCTCCCGCGTCGAGAAAAGTGAGATCGCCCGCACCTACCGCTACGTCGTGCGCGAACTCGGTCTCGAGATCCGGCCCGCCGATCCCGAGAGCTACGTGCCCCGCTTCGCCTCGGCGCTGGAGATCTCCGACGAGGCGGAGGGCCGGGCTCGCAAATTGCTCCGGAACGCCAAGGACCAGGGCGTTCACAGCGGTAAGAGTCCCGTCGGGCTGGCCGCCGCGGCGGTCTATGCCGCCGCGTTGCTCACCAACGAGAAGACAACCCAGGCCGCCGTCAGCGAGGTCGCTGACATCTCAGAGGTCACGATCCGCAATCGCTATCACGAGCTGCTCGAAGCCGAACAGGACCTCCAGCTAGTCTAA
PROTEIN sequence
Length: 328
MKRTDTRTRTRVSKEQRETESETNEERNTLDCPECGGKVIADGGHGETVCADCGLVIAENEIDRGPEWRAFDSQEKNQKSRVGAPTTKMMHDKGLSTNIDWRDKDAYGRSLDSRQRAKMQRLRKWNERFRTRDSKDRNLKQALGEIDRMASALGLPETVRETASVIYRRALDENLLPGRSIEGVSTSAVYAAARQAGVPRSLDEITEVSRVEKSEIARTYRYVVRELGLEIRPADPESYVPRFASALEISDEAEGRARKLLRNAKDQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLEAEQDLQLV*