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sw_5_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_138_1
unknown

Not on your lists

comp(1..183)
DNA (183bp) protein (61aa)

This feature has no annotations

sw_5_scaffold_138_2
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(310..609)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EB07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ44052.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_5_scaffold_138_3
unknown

Not on your lists

1412..1705
DNA (294bp) protein (98aa)

This feature has no annotations

sw_5_scaffold_138_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1724..2245
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M8Y5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42206.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_5_scaffold_138_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2288..2836
DNA (549bp) protein (183aa)
Peptidase S26B, signal peptidase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCS1_HALMO
Peptidase S26B, signal peptidase {ECO:0000313|EMBL:EMA42205.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
peptidase S26B, signal peptidase
sw_5_scaffold_138_6
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2896..3924
DNA (1029bp) protein (343aa)
Metallophosphoesterase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0A7I4_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:ELY94321.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990.
metallophosphoesterase
sw_5_scaffold_138_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3993..5321)
DNA (1329bp) protein (443aa)
Flavin-containing amine-oxidoreductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MKW7_HALMO
Flavin-containing amine-oxidoreductase {ECO:0000313|EMBL:EMA46347.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus mo
flavin-containing amine-oxidoreductase
sw_5_scaffold_138_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5507..6697
DNA (1191bp) protein (397aa)
Threonine synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJJ1_9EURY
Threonine synthase {ECO:0000313|EMBL:EMA45508.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5
threonine synthase
sw_5_scaffold_138_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6989..7684
DNA (696bp) protein (232aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5Z1_9EURY
sw_5_scaffold_138_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7903..8886)
DNA (984bp) protein (328aa)
Transcription initiation factor IIB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRM9_NATPD
tfbA_3; transcription initiation factor TFB 3
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_5_scaffold_138_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9234..11087)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44937.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_138_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11299..12354
DNA (1056bp) protein (352aa)
ocd1; ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRU4_9EURY
Ornithine cyclodeaminase {ECO:0000313|EMBL:EFW92713.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
sw_5_scaffold_138_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12447..13043
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41459.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_138_14
unknown

Not on your lists

13062..13283
DNA (222bp) protein (74aa)

This feature has no annotations

sw_5_scaffold_138_15
unknown

Not on your lists

13317..13574
DNA (258bp) protein (86aa)

This feature has no annotations

sw_5_scaffold_138_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13622..13948)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYE1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49425.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_5_scaffold_138_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13980..15137)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27426.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_138_18
unknown

Not on your lists

15401..16036
DNA (636bp) protein (212aa)

This feature has no annotations

sw_5_scaffold_138_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16033..16257)
DNA (225bp) protein (75aa)
H/ACA RNA-protein complex component Gar1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N459_9EURY
H/ACA RNA-protein complex component Gar1 {ECO:0000313|EMBL:EMA52651.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
snornp protein gar1
sw_5_scaffold_138_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16340..16618)
DNA (279bp) protein (93aa)
Signal recognition particle 19 kDa protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSZ1_9EURY
Signal recognition particle 19 kDa protein {ECO:0000256|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000256|HAMAP-Rule:MF_00305};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
signal recognition particle 19 kDa protein
sw_5_scaffold_138_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16765..18087)
DNA (1323bp) protein (441aa)
Periplasmic binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ26_9EURY
Periplasmic binding protein {ECO:0000313|EMBL:EMA38822.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
periplasmic binding protein
sw_5_scaffold_138_22
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18149..19252
DNA (1104bp) protein (368aa)
ABC-type vitamin B12 transporter, permease component BtuC n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFG2_9EURY
btuC; ABC-type vitamin B12 transporter, permease component BtuC
ABC-type vitamin B12 transporter, permease component BtuC {ECO:0000313|EMBL:CCQ34377.1}; Cobalamin import system permease protein BtuC {ECO:0000313|EMBL:ERJ06063.1}; TaxID=1033806 species="Archaea; Eu
sw_5_scaffold_138_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19249..20544
DNA (1296bp) protein (432aa)
fhuD; ABC-type cobalamin/Fe(III)-siderophore transport system, ATPase component (EC:3.6.3.34)
ABC transporter ATP-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N409_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA52672.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
sw_5_scaffold_138_24
unknown

Not on your lists

comp(20587..20874)
DNA (288bp) protein (96aa)

This feature has no annotations

sw_5_scaffold_138_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20960..21493)
DNA (534bp) protein (178aa)
Membrane-flanked domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTT5_9EURY
Membrane-flanked domain-containing protein {ECO:0000313|EMBL:EMA49142.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
sw_5_scaffold_138_26
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21673..22335
DNA (663bp) protein (221aa)
Transcriptional activator, TenA family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQG9_9EURY
Transcriptional activator, TenA family protein {ECO:0000313|EMBL:EMA35726.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
transcriptional activator, TenA family protein
sw_5_scaffold_138_27
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22332..23057
DNA (726bp) protein (242aa)
Transcriptional activator, TenA family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTE9_HALUD
transcriptional activator, TenA family
Transcriptional activator, TenA family {ECO:0000313|EMBL:ACV10871.1}; Flags: Precursor;; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" s
sw_5_scaffold_138_28
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23090..23251)
DNA (162bp) protein (54aa)
Drug resistance transporter, Bcr/CflA subfamily protein {ECO:0000313|EMBL:ELZ09492.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Ha
sw_5_scaffold_138_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23376..24299)
DNA (924bp) protein (308aa)
HTH DNA-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEH2_9EURY
HTH DNA-binding protein {ECO:0000313|EMBL:ELZ20284.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
XRE family transcriptional regulator
sw_5_scaffold_138_30
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24450..26177
DNA (1728bp) protein (576aa)
Sodium-solute symporter putative n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KKB3_9EURY
putP; sodium-solute symporter putative
Sodium-solute symporter putative {ECO:0000313|EMBL:EMA20604.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californ
Displaying items 1-30 of 35 in total

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