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sw_5_scaffold_1135

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1135_1
unknown

Not on your lists

2..124
DNA (123bp) protein (41aa)

This feature has no annotations

sw_5_scaffold_1135_2
unknown

Not on your lists

comp(399..584)
DNA (186bp) protein (62aa)

This feature has no annotations

sw_5_scaffold_1135_3
R_OD1_Yanofskybacteria_44_17, Yanofskybacteria, Parcubacteria, Bacteria

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802..1695
DNA (894bp) protein (298aa)
Oxidoreductase domain protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_17_curated
Oxidoreductase domain protein id=5800131 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Oxidoreductase domain protein
sw_5_scaffold_1135_4
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1777..2151
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M0R3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38214.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
thiol-disulfide oxidoreductase
sw_5_scaffold_1135_5
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2222..2515)
DNA (294bp) protein (98aa)
Transcriptional regulator, PadR family n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YF01_9EURY
Transcriptional regulator, PadR family {ECO:0000313|EMBL:GAD52496.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
hypothetical protein
sw_5_scaffold_1135_6
unknown

Not on your lists

comp(2964..3710)
DNA (747bp) protein (249aa)

This feature has no annotations

sw_5_scaffold_1135_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4435..5646
DNA (1212bp) protein (404aa)
Sugar transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1U9_9EURY
Sugar transporter {ECO:0000313|EMBL:ELZ28838.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
MFS transporter
sw_5_scaffold_1135_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5728..6501
DNA (774bp) protein (258aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSN8_9EURY
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EFW92447.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladap
sugar phosphate isomerase/epimerase
sw_5_scaffold_1135_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6638..7327
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLJ8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49017.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_1135_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7346..8707
DNA (1362bp) protein (454aa)
TrkA-C domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY73_9EURY
TrkA-C domain protein {ECO:0000313|EMBL:ELZ28181.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
TrkA-C domain protein
sw_5_scaffold_1135_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8704..9273
DNA (570bp) protein (190aa)
Divalent cation transporter/divalent cation transporter subunit II, MgtE family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0H4_9EURY
Divalent cation transporter/divalent cation transporter subunit II, MgtE family protein {ECO:0000313|EMBL:ELZ28182.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
ABC transporter permease
sw_5_scaffold_1135_12
unknown

Not on your lists

comp(9999..10352)
DNA (354bp) protein (118aa)

This feature has no annotations

sw_5_scaffold_1135_13
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10383..10712)
DNA (330bp) protein (110aa)
Phosphoribosyltransferase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XAB2_9EURY
Phosphoribosyltransferase {ECO:0000313|EMBL:ELY58694.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermon
phosphoribosyltransferase
sw_5_scaffold_1135_14
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10802..11611
DNA (810bp) protein (270aa)
Amidase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HNF7_9EURY
Amidase {ECO:0000313|EMBL:ELZ85237.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;"
amidase
sw_5_scaffold_1135_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11699..12532)
DNA (834bp) protein (278aa)
Aldo/keto reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7E6_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:EMA53478.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
aldo/keto reductase
sw_5_scaffold_1135_16

Not on your lists

comp(12620..13924)
DNA (1305bp) protein (435aa)
Sugar phosphate permease (Fragment) n=1 Tax=uncultured archaeon A07HB70 RepID=V4XXP8_9ARCH
Sugar phosphate permease {ECO:0000313|EMBL:ESS07053.1}; Flags: Fragment;; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
major facilitator superfamily transporter
sw_5_scaffold_1135_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14161..14535)
DNA (375bp) protein (125aa)
Aldo/keto reductase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQX9_9EURY
NAD(P)H-dependent xylose reductase-like protein
Aldo/keto reductase {ECO:0000313|EMBL:EFW93517.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus D
Displaying 17 items

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