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sw_5_scaffold_1048

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1048_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..514)
DNA (513bp) protein (171aa)
IS1341-type transposase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIH4_HALMO
IS1341-type transposase {ECO:0000313|EMBL:EMA45158.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
tnp4; IS1341-type transposase
sw_5_scaffold_1048_2
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1324..3474)
DNA (2151bp) protein (717aa)
sqdB; UDP-sulfoquinovose synthase (EC:3.13.1.1)
UDP-sulfoquinovose synthase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0STT1_9EURY
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:ELZ21470.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM
sw_5_scaffold_1048_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3620..5833)
DNA (2214bp) protein (738aa)
DNA mismatch repair protein MutL n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP70_9EURY
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
mutL; DNA mismatch repair protein MutL
sw_5_scaffold_1048_4
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6353..6727
DNA (375bp) protein (125aa)
id=24650731 bin=uncultivated_archaeon_J07ABHX67 tax=uncultivated_archaeon_J07ABHX67
id=24650731 Tax=RBG_16_Desulfobacca_60_12_curated
sw_5_scaffold_1048_5
unknown

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7670..7843
DNA (174bp) protein (58aa)

This feature has no annotations

sw_5_scaffold_1048_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8825..11215)
DNA (2391bp) protein (797aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin n=2 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQV4_9EURY
peptidase S8 and S53, subtilisin, kexin, sedolisin
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:CCQ32989.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source=
sw_5_scaffold_1048_7
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11303..13144)
DNA (1842bp) protein (614aa)
glmS2; glucosamine-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JVT8_9EURY
sw_5_scaffold_1048_8
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13144..13434)
DNA (291bp) protein (97aa)
graD4c; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L195_9EURY
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:EMA26858.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_5_scaffold_1048_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13431..14237)
DNA (807bp) protein (269aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:CCQ32995.1}; EC=2.7.7.24 {ECO:0000313|EMBL:CCQ32995.1};; Glucose-1-phosphate thymidylyltransferase protein {ECO:0000313|EMBL:ERJ06866.1}; EC
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ29_9EURY
sw_5_scaffold_1048_10
unknown

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comp(14355..14423)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 10 items

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