ggKbase home page

sw_5_scaffold_1054

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1054_1
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

318..1322
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XW99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY66015.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_5_scaffold_1054_2
unknown

Not on your lists

comp(1415..1639)
DNA (225bp) protein (75aa)

This feature has no annotations

sw_5_scaffold_1054_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2587..3135)
DNA (549bp) protein (183aa)
XRE family transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG47_9EURY
XRE family transcriptional regulator {ECO:0000313|EMBL:EMA44681.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
transcriptional regulator
sw_5_scaffold_1054_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3176..3547)
DNA (372bp) protein (124aa)
UPF0212 protein NP_3468A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPX3_NATPD
hypothetical protein
UPF0212 protein NP_3468A {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_5_scaffold_1054_5
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4056..4238
DNA (183bp) protein (61aa)
Uncharacterized protein n=6 Tax=Haloferax RepID=L5NW76_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ65064.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
sw_5_scaffold_1054_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4312..5013
DNA (702bp) protein (234aa)
Proteasome subunit beta {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PSB_NATPD
psmB; proteasome beta subunit
sw_5_scaffold_1054_7
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5134..6207)
DNA (1074bp) protein (358aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P1L7_9EURY
sw_5_scaffold_1054_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6294..6944)
DNA (651bp) protein (217aa)
metalloprotease (EC:3.4.24.-)
M50 family metalloprotease {ECO:0000313|EMBL:CAI49443.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAI49443.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
M50 family metalloprotease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR01_NATPD
sw_5_scaffold_1054_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6941..8449)
DNA (1509bp) protein (503aa)
TraB family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRR4_NATM8
TraB family protein
TraB family protein {ECO:0000313|EMBL:CCQ36936.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_5_scaffold_1054_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8677..9117)
DNA (441bp) protein (147aa)
Thioesterase superfamily protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4R7_HALJB
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADJ15534.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccu
sw_5_scaffold_1054_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9297..10655)
DNA (1359bp) protein (453aa)
cysteine synthase (EC:2.5.1.47 2.5.1.52)
Cysteine synthase {ECO:0000313|EMBL:ADQ67132.1}; EC=2.5.1.47 {ECO:0000313|EMBL:ADQ67132.1};; EC=2.5.1.52 {ECO:0000313|EMBL:ADQ67132.1};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Hal
Cysteine synthase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NKY0_HALBP
sw_5_scaffold_1054_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10801..11613
DNA (813bp) protein (271aa)
DisA-N domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INW4_NATPD
hypothetical protein
DisA-N domain protein {ECO:0000313|EMBL:CAI50188.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_5_scaffold_1054_13
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11614..12444
DNA (831bp) protein (277aa)
Mechanosensitive ion channel n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KVT2_HALAR
Mechanosensitive ion channel {ECO:0000313|EMBL:EMA24334.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinens
mechanosensitive ion channel protein MscS
sw_5_scaffold_1054_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12451..13044)
DNA (594bp) protein (198aa)
O-acetyltransferase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LG03_9EURY
O-acetyltransferase {ECO:0000313|EMBL:EMA30930.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
acetyltransferase
sw_5_scaffold_1054_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13121..14479)
DNA (1359bp) protein (453aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP26_9EURY
phosphoribosylamine--glycine ligase
sw_5_scaffold_1054_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14595..16796)
DNA (2202bp) protein (734aa)
Transglutaminase-like enzyme, cysteine protease n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NM42_HALBP
transglutaminase-like enzyme, cysteine protease
Transglutaminase-like enzyme, cysteine protease {ECO:0000313|EMBL:ELY27364.1}; Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:ADQ66141.1}; TaxID=469382 species="Archaea; E
sw_5_scaffold_1054_17
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17277..19502
DNA (2226bp) protein (742aa)
thymidylate kinase (EC:2.7.4.9)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPL0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA46400.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
sw_5_scaffold_1054_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19752..20144)
DNA (393bp) protein (131aa)
Thioredoxin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DJZ1_9EURY
Thioredoxin {ECO:0000313|EMBL:ELZ34479.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
thioredoxin
sw_5_scaffold_1054_19
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20732..21871)
DNA (1140bp) protein (380aa)
Alanine racemase domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S2N1_HALTV
alanine racemase
Alanine racemase domain protein {ECO:0000313|EMBL:ADB63628.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenic
sw_5_scaffold_1054_trna_1
unknown

Not on your lists

comp(22057..22141)
DNA (85bp)
transferRNA
sw_5_scaffold_1054_20
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22181..22633)
DNA (453bp) protein (151aa)
Uncharacterized conserved protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMA6_HALBP
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ADQ67311.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY28526.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
sw_5_scaffold_1054_21
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22758..24014)
DNA (1257bp) protein (419aa)
Transposase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B0A3_9EURY
Transposase {ECO:0000313|EMBL:ELZ03643.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
transposase
sw_5_scaffold_1054_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24187..24522
DNA (336bp) protein (112aa)
Cyclin domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPK1_NATPD
tfbA_4; transcription initiation factor TFB 4
Cyclin domain protein {ECO:0000313|EMBL:CAI49950.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_5_scaffold_1054_23
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24530..25027)
DNA (498bp) protein (166aa)
Cytidyltransferase-related enzyme {ECO:0000313|EMBL:ADQ67118.1}; Phosphopantetheine adenylyltransferase {ECO:0000313|EMBL:ELY29666.1}; EC=2.7.7.3 {ECO:0000313|EMBL:ELY29666.1};; TaxID=469382 species="
Cytidyltransferase-related enzyme n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTR6_HALBP
cytidyltransferase-related enzyme
sw_5_scaffold_1054_24
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25150..25644)
DNA (495bp) protein (165aa)
Transcription regulator n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYY4_HALVA
Transcription regulator {ECO:0000313|EMBL:EMA01941.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
transcription regulator
sw_5_scaffold_1054_25
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25737..26585)
DNA (849bp) protein (283aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=1476858 species=
Carboxylate-amine ligase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GI56_9EURY
gamma-glutamylcysteine synthetase
Displaying 26 items

View Taxonomy