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sw_5_scaffold_2546

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2546_1
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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104..1537
DNA (1434bp) protein (478aa)
norM; MATE efflux family protein id=24651835 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Putative efflux protein, MATE family {ECO:0000313|EMBL:ERH11548.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
norM; sodium-driven multidrug efflux pump
sw_5_scaffold_2546_2
unknown

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2104..2235
DNA (132bp) protein (44aa)

This feature has no annotations

sw_5_scaffold_2546_3

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comp(2810..3322)
DNA (513bp) protein (171aa)
act1; acyl-CoA thioester hydrolase (EC:3.1.2.-)
Acyl-CoA hydrolase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWC2_9ARCH
Acyl-CoA hydrolase {ECO:0000313|EMBL:ESS02837.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_5_scaffold_2546_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4175..4711
DNA (537bp) protein (179aa)
ArsR family regulatory protein {ECO:0000313|EMBL:ACV10638.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensi
sw_5_scaffold_2546_5

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4770..6083
DNA (1314bp) protein (438aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZTJ9_9ARCH
sw_5_scaffold_2546_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6143..6550
DNA (408bp) protein (136aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQN6_HALBP
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ADQ66724.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halo
sw_5_scaffold_2546_7
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6802..8346
DNA (1545bp) protein (515aa)
Sulfatase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TX88_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KEQ27823.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
sulfatase
sw_5_scaffold_2546_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8521..9024)
DNA (504bp) protein (168aa)
Cupin n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PBQ9_9EURY
Cupin {ECO:0000313|EMBL:EMA66270.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
cupin
sw_5_scaffold_2546_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9150..10175
DNA (1026bp) protein (342aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
site-specific DNA-methyltransferase (EC:2.1.1.-)
Modification methylase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQN2_HALMO
sw_5_scaffold_2546_10
unknown

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comp(10419..10568)
DNA (150bp) protein (50aa)

This feature has no annotations

sw_5_scaffold_2546_11
unknown

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comp(10562..11647)
DNA (1086bp) protein (362aa)

This feature has no annotations

sw_5_scaffold_2546_12
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12835..13026)
DNA (192bp) protein (64aa)
Iron ABC transporter substrate-binding protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JF86_9EURY
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA06355.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
Fe3+-hydroxamate ABC transporter periplasmic component-like protein
sw_5_scaffold_2546_13
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13040..13870
DNA (831bp) protein (277aa)
Iron ABC transporter substrate-binding protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HQC8_9EURY
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ85304.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
iron ABC transporter substrate-binding protein
Displaying 13 items

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