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sw_5_scaffold_1902

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1902_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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392..928
DNA (537bp) protein (179aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NW67_HALMD
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ACV48196.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source
sw_5_scaffold_1902_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1181..2008
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_001
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2E4V4_9EURY
3-methyl-2-oxobutanoate hydroxymethyltransferase
sw_5_scaffold_1902_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2199..2429
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NW71_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48200.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_1902_4
unknown

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comp(2794..2988)
DNA (195bp) protein (65aa)

This feature has no annotations

sw_5_scaffold_1902_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3209..3898)
DNA (690bp) protein (230aa)
Os08g0413050; Hypothetical protein. id=24647661 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08796.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_5_scaffold_1902_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3963..4583
DNA (621bp) protein (207aa)
ATPase AAA n=2 Tax=Halobiforma lacisalsi RepID=M0L498_9EURY
ATPase AAA {ECO:0000313|EMBL:EMA27908.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
AAA-type ATPase (transitional ATPase homolog)
sw_5_scaffold_1902_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4599..5510)
DNA (912bp) protein (304aa)
Conserved hypothetical membrane protein (DUF369) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIH3_9EURY
conserved hypothetical membrane protein (DUF369)
Conserved hypothetical membrane protein (DUF369) {ECO:0000313|EMBL:CCQ34819.1}; Uncharacterized protein {ECO:0000313|EMBL:ERJ07053.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halo
sw_5_scaffold_1902_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5646..8654)
DNA (3009bp) protein (1003aa)
Transmembrane oligosaccharyl transferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MYS5_9EURY
Transmembrane oligosaccharyl transferase {ECO:0000313|EMBL:EMA49545.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
tot; transmembrane oligosaccharyl transferase
sw_5_scaffold_1902_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8819..9766
DNA (948bp) protein (316aa)
Glycosyl transferase family 2 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NSR6_HALUD
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACV10727.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
sw_5_scaffold_1902_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9794..10591)
DNA (798bp) protein (266aa)
Sugar-specific transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH97_9EURY
Sugar-specific transcriptional regulator {ECO:0000313|EMBL:EMA45102.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
trmB2; sugar-specific transcriptional regulator
sw_5_scaffold_1902_11
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11133..11609)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NWT7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA62422.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_5_scaffold_1902_12
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11650..12294)
DNA (645bp) protein (215aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrial
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AZA5_9EURY
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
sw_5_scaffold_1902_13
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12291..12938)
DNA (648bp) protein (216aa)
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LZK9_9EURY
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein {ECO:0000313|EMBL:EMA38598.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobi
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein
sw_5_scaffold_1902_14
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13258..13836)
DNA (579bp) protein (193aa)
CBS domain protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YWY0_9EURY
CBS domain protein {ECO:0000313|EMBL:GAD53550.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
transcriptional regulator
sw_5_scaffold_1902_15

Not on your lists

13970..14884
DNA (915bp) protein (305aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDZ4_9ARCH
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ESS06199.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
nucleoside-diphosphate-sugar epimerase
sw_5_scaffold_1902_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14914..15531
DNA (618bp) protein (206aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
Cytidylate kinase n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPC3_HALBP
cytidylate kinase
sw_5_scaffold_1902_17
unknown

Not on your lists

comp(15767..15994)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_5_scaffold_1902_18
unknown

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comp(15969..16040)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 18 items

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