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sw_5_scaffold_3037

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_3037_1
unknown

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3..551
DNA (549bp) protein (183aa)

This feature has no annotations

sw_5_scaffold_3037_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(453..1202)
DNA (750bp) protein (250aa)
TyrA operon protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M033_9EURY
TyrA operon protein {ECO:0000313|EMBL:EMA37974.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
methyltransferase family protein
sw_5_scaffold_3037_3
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1181..1909)
DNA (729bp) protein (243aa)
Type 12 methyltransferase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W206_9EURY
Type 12 methyltransferase {ECO:0000313|EMBL:ELY43382.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens
methyltransferase type 12
sw_5_scaffold_3037_4

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comp(1906..2505)
DNA (600bp) protein (200aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:ESS06898.1}; EC=1.3.1.12 {ECO:0000313|EMBL:ESS06898.1};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Prephenate dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XX98_9ARCH
prephenate dehydrogenase
sw_5_scaffold_3037_5
unknown

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2607..2870
DNA (264bp) protein (88aa)

This feature has no annotations

sw_5_scaffold_3037_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2908..4002)
DNA (1095bp) protein (365aa)
pepQ; aminopeptidase (EC:3.4.11.9)
Peptidase M24 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQG7_NATPD
Peptidase M24 family protein (Homolog to Xaa-Pro dipeptidase) {ECO:0000313|EMBL:CAI49629.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_5_scaffold_3037_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4051..4815)
DNA (765bp) protein (255aa)
psmA; proteasome alpha subunit (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLH6_9EURY
sw_5_scaffold_3037_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4819..5295)
DNA (477bp) protein (159aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
rpp14; ribonuclease P subunit P14 (EC:3.1.26.5)
Ribonuclease P protein component 2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQH0_9EURY
sw_5_scaffold_3037_9
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6010..6777)
DNA (768bp) protein (256aa)
Ribonuclease P protein component 3 {ECO:0000256|HAMAP-Rule:MF_00756}; Short=RNase P component 3 {ECO:0000256|HAMAP-Rule:MF_00756};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00756};; Rpp30 {ECO:0000256|H
Ribonuclease P protein component 3 n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YNW4_9EURY
ribonuclease P
sw_5_scaffold_3037_10
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6793..7863)
DNA (1071bp) protein (357aa)
Nucleoside deaminase (Cytosine deaminase, guanine deaminase) amidohydrolase,chlorohydrolase family protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0ILJ4_9EURY
Nucleoside deaminase (Cytosine deaminase, guanine deaminase) amidohydrolase,chlorohydrolase family protein {ECO:0000313|EMBL:ELZ96728.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Ha
guaD_2; nucleoside deaminase (cytosine deaminase, guanine deaminase) amidohydrolase,chlorohydrolase family protein
sw_5_scaffold_3037_11
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8035..8793
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W5Z7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00078.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_5_scaffold_3037_12
unknown

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comp(8806..9615)
DNA (810bp) protein (270aa)

This feature has no annotations

Displaying 12 items

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