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sw_5_scaffold_3115

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_3115_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..662)
DNA (660bp) protein (220aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
menC; O-succinylbenzoate synthase (EC:4.2.1.-)
Chloromuconate cycloisomerase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MKL2_HALMO
sw_5_scaffold_3115_2
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(666..1664)
DNA (999bp) protein (333aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=2 Tax=Haloarcula hispanica RepID=G0HRA9_HALHT
1,4-dihydroxy-2-naphthoate prenyltransferase
sw_5_scaffold_3115_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

1812..2150
DNA (339bp) protein (113aa)
Heparinase II/III-like protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4JYI6_CLOPA
Heparinase II/III-like protein Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Heparinase II/III-like protein
sw_5_scaffold_3115_4
unknown

Not on your lists

2317..2703
DNA (387bp) protein (129aa)

This feature has no annotations

sw_5_scaffold_3115_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3375..3572)
DNA (198bp) protein (66aa)
menB; naphthoate synthase (EC:4.1.3.36)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=662476 speci
Naphthoate synthase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JX94_9EURY
sw_5_scaffold_3115_6
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3569..4405)
DNA (837bp) protein (279aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=882086 speci
menB; naphthoate synthase (EC:4.1.3.36)
Dihydroxynaphthoate synthase n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V1G0_9PSEU
sw_5_scaffold_3115_7
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4507..5232)
DNA (726bp) protein (242aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC:2.2.1.9)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W4A2_9EURY
sw_5_scaffold_3115_8
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5565..6461
DNA (897bp) protein (299aa)
Cell wall surface anchor family protein n=1 Tax=Streptococcus suis R61 RepID=G5KX61_STRSU
Cell wall surface anchor family protein {ECO:0000313|EMBL:EHC03820.1}; TaxID=996306 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus su
sw_5_scaffold_3115_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6388..7689)
DNA (1302bp) protein (434aa)
Isochorismate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPW4_9EURY
Isochorismate synthase {ECO:0000313|EMBL:EMA47398.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus D
isochorismate synthase
sw_5_scaffold_3115_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7953..8291)
DNA (339bp) protein (113aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2V0_HALJB
oxidoreductase molybdopterin binding protein
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ADJ15057.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Ha
sw_5_scaffold_3115_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8623..8835
DNA (213bp) protein (71aa)
csg2; surface glycoprotein id=24655132 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG88667.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
surface glycoprotein precursor
sw_5_scaffold_3115_12
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8877..9155
DNA (279bp) protein (93aa)
hypothetical protein id=24655133 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:EMA58371.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_5_scaffold_3115_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9248..10633)
DNA (1386bp) protein (462aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=24616210 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1324957 species="Archaea; Eu
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
sw_5_scaffold_3115_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11144..11473
DNA (330bp) protein (110aa)
Receiver box response regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQQ0_NATPD
response regulator
Receiver box response regulator {ECO:0000313|EMBL:CAI49544.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_5_scaffold_3115_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11507..11989)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6CSJ4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ32162.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_5_scaffold_3115_16
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12059..13342)
DNA (1284bp) protein (428aa)
Putative acetyl xylan esterase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPW0_HALUD
acetyl xylan esterase
Putative acetyl xylan esterase {ECO:0000313|EMBL:ACV10407.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensi
sw_5_scaffold_3115_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13666..14280)
DNA (615bp) protein (205aa)
Transcriptional regulator n=1 Tax=Halogranum salarium B-1 RepID=J3A6Z8_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EJN61328.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
regulatory protein ArsR
sw_5_scaffold_3115_18
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14425..15780)
DNA (1356bp) protein (452aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B {ECO:0000313|EMBL:AKH97146.1}; EC=6.3.5.6 {ECO:0000313|EMBL:AKH97146.1};; EC=6.3.5.7 {ECO:0000313|EMBL:AKH97146.1};; TaxID=1604004 spec
aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
aspartyl/glutamyl-tRNA amidotransferase subunit B n=1 Tax=Halorubrum sp. T3 RepID=UPI000379266F
sw_5_scaffold_3115_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15974..17617
DNA (1644bp) protein (548aa)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2E5_HALMD
phosphoribosylglycinamide formyltransferase
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:ACV49260.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halom
sw_5_scaffold_3115_20
unknown

Not on your lists

17657..18100
DNA (444bp) protein (148aa)

This feature has no annotations

sw_5_scaffold_3115_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18174..20633
DNA (2460bp) protein (820aa)
Dihydropteroate synthase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXN2_9EURY
Dihydropteroate synthase {ECO:0000313|EMBL:EMA37928.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
dihydropteroate synthase
sw_5_scaffold_3115_22
unknown

Not on your lists

comp(20677..21195)
DNA (519bp) protein (173aa)

This feature has no annotations

sw_5_scaffold_3115_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21615..21956
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT34_NATPD
smc operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48700.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_3115_24
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22113..23165
DNA (1053bp) protein (351aa)
Chromosome partition protein Smc n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WP06_9EURY
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeo
chromosome segregation protein SMC
sw_5_scaffold_3115_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23105..23389
DNA (285bp) protein (95aa)
Uncharacterized protein (Fragment) n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U4G7_9EURY
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ham
chromosome segregation protein SMC
Displaying 25 items

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