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sw_5_scaffold_2003

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2003_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

62..766
DNA (705bp) protein (235aa)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MVF1_HALMO
pcrB; geranylgeranylglyceryl phosphate synthase-like protein
sw_5_scaffold_2003_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


903..2198
DNA (1296bp) protein (432aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L398_9EURY
Aspartyl-tRNA ligase {ECO:0000313|EMBL:EMA26929.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 337
sw_5_scaffold_2003_3
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2281..3144
DNA (864bp) protein (288aa)
GHMP kinase n=1 Tax=Halobacterium sp. DL1 RepID=G4II63_9EURY
Sugar kinase {ECO:0000313|EMBL:AHG03088.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_5_scaffold_2003_4
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3463..5382)
DNA (1920bp) protein (640aa)
mRNA 3-end processing factor-like protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HFH7_9EURY
mRNA 3-end processing factor-like protein {ECO:0000313|EMBL:ELZ83286.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibb
epf1; mRNA 3-end processing factor-like protein
sw_5_scaffold_2003_5
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5576..6052
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PGL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA68729.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_5_scaffold_2003_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6353..7771
DNA (1419bp) protein (473aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=662477 species="Archaea; Euryarc
Proline--tRNA ligase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JEW2_HALVA
prolyl-tRNA synthetase
sw_5_scaffold_2003_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7894..8466
DNA (573bp) protein (191aa)
glutamate synthase (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:ACV49240.1}; EC=1.4.7.1 {ECO:0000313|EMBL:ACV49240.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
glutamate synthase n=1 Tax=Halomicrobium katesii RepID=UPI0003692509
sw_5_scaffold_2003_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8492..12349
DNA (3858bp) protein (1286aa)
gltB; glutamate synthase large subunit (EC:1.4.-.-)
Glutamate synthase large subunit {ECO:0000313|EMBL:CCQ37130.1}; EC=1.4.-.- {ECO:0000313|EMBL:CCQ37130.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
Glutamate synthase large subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS44_NATM8
sw_5_scaffold_2003_9
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12577..12774)
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=G0HRY5_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB65954.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_5_scaffold_2003_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12948..13736
DNA (789bp) protein (263aa)
Acyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGF5_9EURY
Acyltransferase {ECO:0000313|EMBL:ELZ34525.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
acyltransferase
sw_5_scaffold_2003_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13796..14971
DNA (1176bp) protein (392aa)
GTP-binding protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPJ1_NATM8
GTP-binding protein
GTP-binding protein {ECO:0000313|EMBL:CCQ35902.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_5_scaffold_2003_12
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14968..15471
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AND1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY99841.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
sw_5_scaffold_2003_13
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(15379..16233)
DNA (855bp) protein (285aa)
Methyltransferase type 11 n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQ51_TRURR
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADI14835.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain
sw_5_scaffold_2003_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16265..17122)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEL6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58476.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ubiquinone biosynthesis protein UbiA
sw_5_scaffold_2003_15
unknown

Not on your lists

17563..17850
DNA (288bp) protein (96aa)

This feature has no annotations

sw_5_scaffold_2003_16
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18645..18809)
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HVB2_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM56341.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_5_scaffold_2003_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19029..20177
DNA (1149bp) protein (383aa)
ctaB; protoheme IX geranylgeranyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4W5_NATM8
Displaying 17 items

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