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sw_5_scaffold_2045

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2045_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(399..725)
DNA (327bp) protein (109aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYK4_9EURY
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ELZ27492.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="H
alcohol dehydrogenase zinc-binding domain protein
sw_5_scaffold_2045_2
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2482..4836
DNA (2355bp) protein (785aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales;
Putative tRNA(Met) cytidine acetyltransferase n=3 Tax=Halococcus hamelinensis RepID=M0M0L3_9EURY
hypothetical protein
sw_5_scaffold_2045_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4837..5319
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXF7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42178.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_5_scaffold_2045_4
unknown

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5414..6469
DNA (1056bp) protein (352aa)

This feature has no annotations

sw_5_scaffold_2045_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6360..6689)
DNA (330bp) protein (110aa)
Ferredoxin n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCQ4_HALMO
Zinc-containing ferredoxin {ECO:0000256|PIRNR:PIRNR000068}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM
ferredoxin
sw_5_scaffold_2045_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6783..8543)
DNA (1761bp) protein (587aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00016154}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00088701};; Glutamyl-tRNA synthetase {ECO:00
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HNJ2_9EURY
sw_5_scaffold_2045_7
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8578..9645
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Halarchaeum acidiphilum RepID=U2YVS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD52852.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
oxidoreductase domain protein
sw_5_scaffold_2045_8
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9819..10589)
DNA (771bp) protein (257aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A1A2_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ELY92096.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba
mandelate racemase/muconate lactonizing protein
sw_5_scaffold_2045_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11172..12116)
DNA (945bp) protein (315aa)
idsA_3; trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase ) (EC:2.5.1.1 2.5.1.10 2.5.1.29)
Geranylgeranyl diphosphate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSI2_9EURY
Geranylgeranyl diphosphate synthase {ECO:0000313|EMBL:ELZ25593.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
sw_5_scaffold_2045_10
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12122..12457)
DNA (336bp) protein (112aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=523841 species="Archaea; Euryarchaeota; Halobac
Putative hydrolase of the metallo-beta-lactamase superfamily n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R851_HALMT
metallo-beta-lactamase superfamily hydrolase
Displaying 10 items

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