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sw_5_scaffold_4520

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_4520_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3..401
DNA (399bp) protein (133aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NP93_HALBP
hypothetical protein
sw_5_scaffold_4520_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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560..1099
DNA (540bp) protein (180aa)
Transcription factor E n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y338_NATM8
tfeA; transcription initiation factor TFE
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
sw_5_scaffold_4520_3
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1100..1774
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0Z7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH97662.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
conserved hypothetical protein (DUF2110)
sw_5_scaffold_4520_4
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1771..2568
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5F2_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15648.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_5_scaffold_4520_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4143..5114
DNA (972bp) protein (324aa)
ATP-NAD kinase (EC:2.7.1.23)
ATP-NAD/AcoX kinase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZX9_9EURY
ATP-NAD/AcoX kinase {ECO:0000313|EMBL:EMA51166.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
sw_5_scaffold_4520_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5285..6274
DNA (990bp) protein (330aa)
Transport system regulatory protein ( substrate phosphate) n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPJ6_9EURY
Transport system regulatory protein ( substrate phosphate) {ECO:0000313|EMBL:ELZ24322.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
regulatory protein
sw_5_scaffold_4520_7

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comp(6398..7396)
DNA (999bp) protein (333aa)
sqdX; glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XX42_9ARCH
Glycosyltransferase {ECO:0000313|EMBL:ESS06833.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_5_scaffold_4520_8
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7458..8975)
DNA (1518bp) protein (506aa)
Putative sugar transferase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HE60_9EURY
Putative sugar transferase {ECO:0000313|EMBL:ELZ82790.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.
gtr-4; sugar transferase
sw_5_scaffold_4520_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9153..9596
DNA (444bp) protein (148aa)
mvaD; diphosphomevalonate decarboxylase (EC:4.1.1.33)
Diphosphomevalonate decarboxylase n=2 Tax=Halococcus hamelinensis RepID=M0M3V1_9EURY
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:EMA39309.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameli
sw_5_scaffold_4520_10
unknown

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9674..9796
DNA (123bp) protein (41aa)

This feature has no annotations

sw_5_scaffold_4520_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10229..10516
DNA (288bp) protein (96aa)
DUF429 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISK8_NATPD
hypothetical protein
DUF429 family protein {ECO:0000313|EMBL:CAI48878.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
Displaying 11 items

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