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sw_5_scaffold_2215

Search features with annotation key words

Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2215_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3..587)
DNA (585bp) protein (195aa)
Zn-dependent hydrolase-like protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LKJ2_9EURY
Zn-dependent hydrolase-like protein {ECO:0000313|EMBL:EMA34041.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi
Zn-dependent hydrolase-like protein
sw_5_scaffold_2215_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(712..2079)
DNA (1368bp) protein (456aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQ69_9EURY
ligB; DNA ligase (ATP)
sw_5_scaffold_2215_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2930..3100)
DNA (171bp) protein (57aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZDV6_9EURY
putative DNA binding protein
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:EJN58860.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1
sw_5_scaffold_2215_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3597..6233)
DNA (2637bp) protein (879aa)
Type II secretion system protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMS4_9EURY
Type II secretion system protein {ECO:0000313|EMBL:ELZ24526.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
type II secretion system protein
sw_5_scaffold_2215_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6230..7051)
DNA (822bp) protein (274aa)
Type II secretion system protein E n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMQ4_9EURY
Type II secretion system protein E {ECO:0000313|EMBL:ELZ24525.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carl
gspE1; type II secretion system protein E
sw_5_scaffold_2215_6
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8153..9673
DNA (1521bp) protein (507aa)
Sodium-solute symporter putative n=2 Tax=Haloarcula hispanica RepID=G0HX02_HALHT
putP; sodium-solute symporter putative
Sodium:proline symporter {ECO:0000313|EMBL:AHB66634.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.
sw_5_scaffold_2215_7
unknown

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9673..9792
DNA (120bp) protein (40aa)

This feature has no annotations

sw_5_scaffold_2215_8
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9838..10122)
DNA (285bp) protein (95aa)
Hypotheical conserved protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YUF1_9EURY
Hypotheical conserved protein {ECO:0000313|EMBL:GAD52645.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.
hypothetical protein
sw_5_scaffold_2215_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10303..11394
DNA (1092bp) protein (364aa)
Thioredoxin reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQ62_9EURY
Thioredoxin reductase {ECO:0000313|EMBL:ELZ24517.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
thioredoxin reductase
sw_5_scaffold_2215_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11495..11791
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000367CE1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48525.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_2215_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12637..13911
DNA (1275bp) protein (425aa)
Replication factor A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPI0_9EURY
Replication factor A {ECO:0000313|EMBL:ELZ24513.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
replication factor A
sw_5_scaffold_2215_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13908..14441
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY69_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48529.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
Displaying 12 items

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