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sw_5_scaffold_2888

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2888_1
unknown

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comp(3..755)
DNA (753bp) protein (251aa)

This feature has no annotations

sw_5_scaffold_2888_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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872..1534
DNA (663bp) protein (221aa)
HTH-10 family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQV6_NATPD
DNA binding protein
HTH-10 family transcription regulator {ECO:0000313|EMBL:CAI49488.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_5_scaffold_2888_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1659..2900)
DNA (1242bp) protein (414aa)
Sugar phosphate permease n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NV82_HALBP
sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:ADQ69071.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquens
sw_5_scaffold_2888_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3134..4840
DNA (1707bp) protein (569aa)
accB_3; acyl-CoA carboxylase 3, carboxyltransferase component (beta subunit) (EC:6.4.1.-)
Propionyl-CoA carboxylase carboxyltransferase component {ECO:0000313|EMBL:CAI49823.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CAI49823.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Propionyl-CoA carboxylase carboxyltransferase component n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPX5_NATPD
sw_5_scaffold_2888_5
unknown

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4967..5998
DNA (1032bp) protein (344aa)

This feature has no annotations

sw_5_scaffold_2888_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6090..7433
DNA (1344bp) protein (448aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2F1_HALMD
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV49266.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_5_scaffold_2888_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7551..8600
DNA (1050bp) protein (350aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 6 (EC:3.1.2.6)
Probable metallo-beta-lactamase family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP88_NATPD
Beta-lactamase domain protein {ECO:0000313|EMBL:CAI50063.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_5_scaffold_2888_8
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8885..9208)
DNA (324bp) protein (108aa)
Proteasome-activating nucleotidase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6A5_HALJB
proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
sw_5_scaffold_2888_9
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9234..10520
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Halorubrum distributum JCM 9100 RepID=M0EEU2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ46275.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
Os08g0413050; Hypothetical protein.
sw_5_scaffold_2888_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10550..11191
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21117.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_2888_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11227..11721)
DNA (495bp) protein (165aa)
phage SPO1 DNA polymerase-related protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] id=24616371 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
uracil-DNA glycosylase-like protein / DNA polymerase bacteriophage-type (EC:2.7.7.7)
Uracil-DNA glycosylase {ECO:0000313|EMBL:ESP87694.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobon
Displaying 11 items

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