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sw_5_scaffold_3200

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_3200_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..210)
DNA (210bp) protein (70aa)
Probable cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Ru
Probable cyclic pyranopterin monophosphate synthase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSF2_9EURY
GTP cyclohydrolase subunit moaa
sw_5_scaffold_3200_2
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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343..1170
DNA (828bp) protein (276aa)
Putative transcriptional regulator, ArsR family n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3K7_HALXS
ArsR family transcriptional regulator
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEH37372.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger x
sw_5_scaffold_3200_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1422..2159)
DNA (738bp) protein (246aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6K7_HALXS
sw_5_scaffold_3200_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2322..2642)
DNA (321bp) protein (107aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome endopeptidase complex (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAN8_9EURY
sw_5_scaffold_3200_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2928..3983
DNA (1056bp) protein (352aa)
ATP-binding protein Mrp n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQU1_NATPD
mrp_1; ATP-binding protein Mrp 1
Fe-S cluster carrier protein ApbC {ECO:0000313|EMBL:CAI49503.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
sw_5_scaffold_3200_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3980..4252
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQU0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49504.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_3200_trna_1
unknown

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4425..4506
DNA (82bp)
transferRNA
sw_5_scaffold_3200_7
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4526..5056
DNA (531bp) protein (177aa)
30S ribosomal protein S13 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KVH9_HALAR
rps13p; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis
sw_5_scaffold_3200_8
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5056..5460
DNA (405bp) protein (135aa)
30S ribosomal protein S4 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J328_HALJB
rps4p; 30S ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccu
sw_5_scaffold_3200_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5457..5855
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTW3_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
rps11; 30S ribosomal protein S11
sw_5_scaffold_3200_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5857..6240
DNA (384bp) protein (128aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
DNA-directed RNA polymerase subunit D {ECO:0000255|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00320};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RPOD_NATPD
sw_5_scaffold_3200_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6240..6584
DNA (345bp) protein (115aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
DNA-directed RNA polymerase subunit D n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSE6_9EURY
sw_5_scaffold_3200_trna_2
unknown

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6719..6803
DNA (85bp)
transferRNA
sw_5_scaffold_3200_12
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6833..7189
DNA (357bp) protein (119aa)
50S ribosomal protein L18e n=9 Tax=Haloarcula RepID=RL18E_HALMA
50S ribosomal protein L18
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
sw_5_scaffold_3200_13

Not on your lists


7186..7623
DNA (438bp) protein (146aa)
50S ribosomal protein L13 n=1 Tax=uncultured archaeon A07HR60 RepID=V4YCJ8_9ARCH
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
rpl13p; 50S ribosomal protein L13P
sw_5_scaffold_3200_14
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7625..8023
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0B8E3_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source
archaeal ribosomal protein S9P
sw_5_scaffold_3200_15
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8055..8249
DNA (195bp) protein (65aa)
rpoN; DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit N n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH4_9EURY
sw_5_scaffold_3200_16

Not on your lists

8246..8440
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured arch
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y0B5_9ARCH
sw_5_scaffold_3200_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8437..9636
DNA (1200bp) protein (400aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=ENO_NATPD
sw_5_scaffold_3200_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


9633..10397
DNA (765bp) protein (255aa)
30S ribosomal protein S2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS2_NATPD
rps2P; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
Displaying 20 items

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