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sw_5_scaffold_4015

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_4015_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..663)
DNA (663bp) protein (221aa)
50S ribosomal protein L32e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUR2_9EURY
50S ribosomal protein L32e {ECO:0000313|EMBL:EMA49371.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
50S ribosomal protein L32e
sw_5_scaffold_4015_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(743..1120)
DNA (378bp) protein (126aa)
50S ribosomal protein L6 n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SPP4_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
rpl6p; 50S ribosomal protein L6P
sw_5_scaffold_4015_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1168..1560)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D948_HALXS
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
sw_5_scaffold_4015_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1560..1742)
DNA (183bp) protein (61aa)
30S ribosomal protein S14 type Z n=2 Tax=Halococcus RepID=M0MF76_HALMO
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morr
rps14P; 30S ribosomal protein S14P
sw_5_scaffold_4015_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1739..2266)
DNA (528bp) protein (176aa)
50S ribosomal protein L5 n=5 Tax=Haloarcula RepID=G0HW39_HALHT
rpl5p; 50S ribosomal protein L5P
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (s
sw_5_scaffold_4015_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2259..3092)
DNA (834bp) protein (278aa)
30S ribosomal protein S4e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKF4_NATM8
rps4e; 30S ribosomal protein S4e
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_5_scaffold_4015_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3089..3451)
DNA (363bp) protein (121aa)
50S ribosomal protein L24P n=1 Tax=Halobacterium sp. DL1 RepID=G4IGL1_9EURY
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp.
rpl24; 50S ribosomal protein L24
sw_5_scaffold_4015_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3448..3846)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL14_NATPD
rpl14p; 50S ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_5_scaffold_4015_9

Not on your lists


comp(3846..4169)
DNA (324bp) protein (108aa)
30S ribosomal protein S17P n=1 Tax=halophilic archaeon DL31 RepID=G2MM79_9ARCH
30S ribosomal protein S17
Ribosomal protein S17P {ECO:0000313|EMBL:AEN06126.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_4015_10
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4275..4466)
DNA (192bp) protein (64aa)
ribonuclease P protein component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TT60_9EURY
sw_5_scaffold_4015_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4469..4669)
DNA (201bp) protein (67aa)
50S ribosomal protein L29P n=9 Tax=Haloarcula RepID=RL29_HALMA
50S ribosomal protein L29
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica
sw_5_scaffold_4015_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4666..5592)
DNA (927bp) protein (309aa)
30S ribosomal protein S3 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKJ1_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
ribosomal protein S3, eukaryotic/archaeal type
sw_5_scaffold_4015_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5592..6062)
DNA (471bp) protein (157aa)
50S ribosomal protein L22P n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL22_NATPD
rpl22p; 50S ribosomal protein L22P
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_5_scaffold_4015_14
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6066..6494)
DNA (429bp) protein (143aa)
30S ribosomal protein S19 n=8 Tax=Haloarcula RepID=RS19_HALMA
rps19p; 30S ribosomal protein S19P
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyti
sw_5_scaffold_4015_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6497..7168)
DNA (672bp) protein (224aa)
50S ribosomal protein L2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP59_NATM8
rpl2; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;
sw_5_scaffold_4015_16
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7169..7426)
DNA (258bp) protein (86aa)
50S ribosomal protein L23P n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D960_HALXS
50S ribosomal protein L23
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strai
sw_5_scaffold_4015_17
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7485..8231)
DNA (747bp) protein (249aa)
rpl4R; 50S ribosomal protein L4; K02930 large subunit ribosomal protein L4e id=24622081 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
rpl4lp; 50S ribosomal protein L4P
sw_5_scaffold_4015_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8231..9205)
DNA (975bp) protein (325aa)
50S ribosomal protein L3 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL3_NATPD
rpl3p; 50S ribosomal protein L3P
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_5_scaffold_4015_19
unknown

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10379..10690
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying 19 items

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