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sw_5_scaffold_140

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_140_1

Not on your lists

comp(332..505)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XFS9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06974.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_5_scaffold_140_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

751..1842
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M3I8_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA40377.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_5_scaffold_140_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1962..2555
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6L4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41457.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_140_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2495..4099)
DNA (1605bp) protein (535aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=122748
Probable cobyrinic acid A,C-diamide synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DI97_9EURY
cobyrinic acid a,c-diamide synthase
sw_5_scaffold_140_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4367..4531
DNA (165bp) protein (55aa)
Regulatory protein Crp n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6N7_9EURY
Regulatory protein Crp {ECO:0000313|EMBL:EMA41048.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
sw_5_scaffold_140_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4528..5190
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWV7_9EURY
Regulatory protein Crp {ECO:0000313|EMBL:EMA53204.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
regulatory protein Crp
sw_5_scaffold_140_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5376..6248)
DNA (873bp) protein (291aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCF8_9EURY
Thiamine-monophosphate kinase {ECO:0000313|EMBL:EMA55652.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
sw_5_scaffold_140_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6393..7412
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8Q4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40790.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_140_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7576..8031
DNA (456bp) protein (152aa)
30S ribosomal protein S19e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4J6_9EURY
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
ribosomal protein S19E (S16A)
sw_5_scaffold_140_10
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8097..9092
DNA (996bp) protein (332aa)
Phenazine biosynthesis protein PhzF family n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQT2_9EURY
Phenazine biosynthesis protein {ECO:0000313|EMBL:KDE56921.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56
phzF; phenazine biosynthetic protein
sw_5_scaffold_140_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9301..9660
DNA (360bp) protein (120aa)
DNA-binding protein C449_14252 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBJ3_9EURY
DNA-binding protein C449_14252 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
hypothetical protein
sw_5_scaffold_140_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9776..10489
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0K3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39206.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_140_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10649..11965
DNA (1317bp) protein (439aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000313|EMBL:EMA37038.1};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LV72_9EURY
sw_5_scaffold_140_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11971..12774
DNA (804bp) protein (268aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=2 Tax=Halococcus hamelinensis RepID=M0M467_9EURY
tRNA pseudouridine synthase A
sw_5_scaffold_140_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12848..13255)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JF17_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58831.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_5_scaffold_140_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13338..14786)
DNA (1449bp) protein (483aa)
Peptidase M28 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3R6_9EURY
Peptidase M28 {ECO:0000313|EMBL:EMA52188.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
peptidase M28
sw_5_scaffold_140_17
unknown

Not on your lists

comp(14946..15350)
DNA (405bp) protein (135aa)

This feature has no annotations

sw_5_scaffold_140_18
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15584..17374
DNA (1791bp) protein (597aa)
Oligoendopeptidase F n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHY5_9EURY
Oligoendopeptidase F {ECO:0000313|EMBL:EMA19435.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 135
oligopeptidase PepB
sw_5_scaffold_140_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17500..18717
DNA (1218bp) protein (406aa)
Proteasome-activating nucleotidase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7C1_9EURY
Proteasome-activating nucleotidase {ECO:0000313|EMBL:EMA53004.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thail
pan1; proteasome-activating nucleotidase
sw_5_scaffold_140_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19173..20327
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N234_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51563.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_140_21
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20433..20642)
DNA (210bp) protein (70aa)
Thioesterase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JAP8_HALVA
thioesterase
Thioesterase {ECO:0000313|EMBL:EMA05074.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
sw_5_scaffold_140_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20669..21742
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGV2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44952.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_140_23
unknown

Not on your lists

comp(21875..22072)
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 23 items

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