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sw_5_scaffold_243

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_243_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..552)
DNA (552bp) protein (184aa)
HTR-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LST5_9EURY
HTR-like protein {ECO:0000313|EMBL:EMA36612.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
HTR-like protein
sw_5_scaffold_243_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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797..2440
DNA (1644bp) protein (548aa)
purNH; phosphoribosylglycinamide formyltransferase / phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.2 2.1.2.3)
Phosphoribosylglycinamide formyltransferase / phosphoribosylaminoimidazolecarboxamide formyltransferase {ECO:0000313|EMBL:CAI48922.1}; EC=2.1.2.2 {ECO:0000313|EMBL:CAI48922.1};; EC=2.1.2.3 {ECO:000031
Phosphoribosylglycinamide formyltransferase / phosphoribosylaminoimidazolecarboxamide formyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISG5_NATPD
sw_5_scaffold_243_3
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2836..5415
DNA (2580bp) protein (860aa)
Dihydropteroate synthase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CD38_9EURY
Dihydropteroate synthase {ECO:0000313|EMBL:ELZ19804.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 1389
dihydropteroate synthase
sw_5_scaffold_243_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5488..5961
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNH4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW94044.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_243_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6135..6989
DNA (855bp) protein (285aa)
Protein-export membrane protein SecF n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MU37_HALMO
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
secF; preprotein translocase subunit SecF
sw_5_scaffold_243_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6986..8605
DNA (1620bp) protein (540aa)
Protein-export membrane protein SecD n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4E5_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
secD; preprotein translocase subunit SecD
sw_5_scaffold_243_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8789..9310)
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RV58_HALTV
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADB61259.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmeni
sw_5_scaffold_243_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9389..10108)
DNA (720bp) protein (240aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=1227456 species="Archaea; Euryarchaeota; H
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3T5_9EURY
sw_5_scaffold_243_9
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10244..11581)
DNA (1338bp) protein (446aa)
Cytochrome P450 n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUK2_HALBP
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:ADQ68722.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain
sw_5_scaffold_243_10
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12522..12968)
DNA (447bp) protein (149aa)
Cytochrome P450 n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H6T1_9EURY
Cytochrome P450 {ECO:0000313|EMBL:ELZ79437.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
cytochrome P450
sw_5_scaffold_243_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13257..13877
DNA (621bp) protein (207aa)
HTH DNA binding domain-containing protein n=2 Tax=Haloarcula hispanica RepID=G0I0S5_HALHT
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHB68338.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601
sw_5_scaffold_243_12
unknown

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comp(13934..14089)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_5_scaffold_243_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14193..15569)
DNA (1377bp) protein (459aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=1227456
tRNA pseudouridine synthase Pus10 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2P2_9EURY
tRNA pseudouridine 55 synthase archaea
sw_5_scaffold_243_14
unknown

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15768..16025
DNA (258bp) protein (86aa)

This feature has no annotations

sw_5_scaffold_243_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16086..16943)
DNA (858bp) protein (286aa)
Formamidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCL5_9EURY
Formamidase {ECO:0000313|EMBL:EMA55571.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
putative acetamidase/formamidase
Displaying 15 items

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