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sw_5_scaffold_258

Search features with annotation key words

Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_258_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..96)
DNA (96bp) protein (32aa)
HGPRTase-like protein {ECO:0000256|HAMAP-Rule:MF_01467}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_01467};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_5_scaffold_258_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

385..2544
DNA (2160bp) protein (720aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3F0J8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61627.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_258_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2719..4434
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EY24_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60152.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_258_4
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4731..5057)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00037117DB
Uncharacterized protein {ECO:0000313|EMBL:EMA72066.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein
sw_5_scaffold_258_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5054..5335)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18G80_HALWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ53020.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_5_scaffold_258_6
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5801..6865)
DNA (1065bp) protein (355aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WHE5_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ELY48777.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubr
alcohol dehydrogenase GroES domain protein
sw_5_scaffold_258_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6975..7628)
DNA (654bp) protein (218aa)
Potassium uptake system protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XDB7_9EURY
K+ transport system, NAD-binding component
Potassium uptake system protein {ECO:0000313|EMBL:ELY59735.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyt
sw_5_scaffold_258_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7948..8604)
DNA (657bp) protein (219aa)
TrkA protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZI32_9EURY
TrkA protein {ECO:0000313|EMBL:EJN60365.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
potassium transporter Trk
sw_5_scaffold_258_9
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8631..10058)
DNA (1428bp) protein (476aa)
Transporter n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IRF8_9EURY
Transporter {ECO:0000313|EMBL:ELZ98418.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-897.;"
cat2; cationic amino acid transport protein
sw_5_scaffold_258_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10220..11095
DNA (876bp) protein (292aa)
Alpha/beta hydrolase fold protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N649_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EMA53356.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
alpha/beta hydrolase fold protein
sw_5_scaffold_258_11
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11270..11749
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W982_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY46020.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
sw_5_scaffold_258_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11859..12965
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYW7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50044.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
recJ4; RecJ-like exonuclease
sw_5_scaffold_258_13
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13068..14042
DNA (975bp) protein (325aa)
Uncharacterized protein n=2 Tax=Halorubrum distributum RepID=M0ECE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ45481.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
hypothetical protein
sw_5_scaffold_258_14
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14065..14655)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PKE7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA70089.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_5_scaffold_258_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14783..15304)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWV2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50041.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_258_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15435..15767
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93114.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
ArsR family transcriptional regulator
sw_5_scaffold_258_17
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15965..16324
DNA (360bp) protein (120aa)
MCP domain-containing signal transducer n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JST9_HALVA
MCP domain-containing signal transducer {ECO:0000313|EMBL:EMA11004.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula v
htr7; MCP domain-containing signal transducer
sw_5_scaffold_258_18
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16703..17302
DNA (600bp) protein (200aa)
Gas vesicle protein GvpE n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YGU1_9EURY
Gas vesicle protein GvpE {ECO:0000313|EMBL:GAD53586.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
Transcriptional regulator PadR-like family
sw_5_scaffold_258_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17488..17856)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEY4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43239.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_258_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(18045..18446)
DNA (402bp) protein (134aa)
30S ribosomal protein S6e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D7Y1_9EURY
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
rps6E; 30S ribosomal protein S6
sw_5_scaffold_258_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18642..20000
DNA (1359bp) protein (453aa)
Beta-lactamase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWU7_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELZ27675.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
RNA-metabolising metallo-beta-lactamase
sw_5_scaffold_258_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20087..20821
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6G9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29759.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_258_trna_1
unknown

Not on your lists

20953..21064
DNA (112bp)
transferRNA
sw_5_scaffold_258_23
unknown

Not on your lists

comp(21409..21597)
DNA (189bp) protein (63aa)

This feature has no annotations

sw_5_scaffold_258_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21680..21895)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5P8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53201.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_258_25
unknown

Not on your lists

22243..22449
DNA (207bp) protein (69aa)

This feature has no annotations

sw_5_scaffold_258_26
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22400..23095)
DNA (696bp) protein (232aa)
Histone deacetylase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T1E2_NATMM
histone deacetylase
Histone deacetylase {ECO:0000313|EMBL:ADD07401.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43099 /
sw_5_scaffold_258_27
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23096..23266)
DNA (171bp) protein (57aa)
Histone deacetylase {ECO:0000313|EMBL:ELY95764.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989.;"
sw_5_scaffold_258_28

Not on your lists

comp(23431..24765)
DNA (1335bp) protein (445aa)
acetylornithine transaminase (EC:2.6.1.11)
Acetylornithine transaminase {ECO:0000313|EMBL:AEN05787.1}; EC=2.6.1.11 {ECO:0000313|EMBL:AEN05787.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Acetylornithine transaminase n=1 Tax=halophilic archaeon DL31 RepID=G2MLW0_9ARCH
sw_5_scaffold_258_29

Not on your lists

25008..26210
DNA (1203bp) protein (401aa)
FAD dependent oxidoreductase n=1 Tax=halophilic archaeon DL31 RepID=G2MMW8_9ARCH
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEN06744.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying items 1-30 of 50 in total

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