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sw_5_scaffold_279

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_279_1
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..399)
DNA (399bp) protein (133aa)
Short-chain family oxidoreductase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HFB5_9EURY
Short-chain family oxidoreductase {ECO:0000313|EMBL:ELZ82427.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATC
sdr; short chain dehydrogenase
sw_5_scaffold_279_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(531..2168)
DNA (1638bp) protein (546aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEQ6_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EMA43149.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
catalytic domain of components of various dehydrogenase complexes
sw_5_scaffold_279_3
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2168..3265)
DNA (1098bp) protein (366aa)
Pyruvate dehydrogenase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9U9_9EURY
Pyruvate dehydrogenase
Pyruvate dehydrogenase {ECO:0000313|EMBL:AGN01834.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;
sw_5_scaffold_279_4
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3270..4376)
DNA (1107bp) protein (369aa)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LJZ3_9EURY
Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha {ECO:0000313|EMBL:EMA33856.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobifo
pyruvate dehydrogenase E1 component subunit alpha
sw_5_scaffold_279_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4583..5677)
DNA (1095bp) protein (365aa)
glycoside hydrolase family protein id=24613700 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Glycoside hydrolase family protein {ECO:0000313|EMBL:ESP89755.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candid
glycoside hydrolase family protein
sw_5_scaffold_279_6
unknown

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5877..6113
DNA (237bp) protein (79aa)

This feature has no annotations

sw_5_scaffold_279_7
unknown

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comp(6812..7351)
DNA (540bp) protein (180aa)

This feature has no annotations

sw_5_scaffold_279_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7633..8304)
DNA (672bp) protein (224aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44780.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator
sw_5_scaffold_279_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8939..9781)
DNA (843bp) protein (281aa)
TrmB family transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMU5_9EURY
TrmB family transcriptional regulator {ECO:0000313|EMBL:EMA46698.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
transcriptional regulator TrmB
sw_5_scaffold_279_10
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10237..11079
DNA (843bp) protein (281aa)
Putative transcriptional regulator n=2 Tax=Haloferax RepID=M0H4D1_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ELZ79381.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii A
transcriptional regulator
sw_5_scaffold_279_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11086..11769
DNA (684bp) protein (228aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ78_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44784.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator
sw_5_scaffold_279_12
unknown

Not on your lists

comp(11864..12478)
DNA (615bp) protein (205aa)

This feature has no annotations

sw_5_scaffold_279_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12961..13896)
DNA (936bp) protein (312aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
lip; lipoyl synthase (EC:2.8.1.-)
Probable lipoyl synthase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MV42_HALMO
sw_5_scaffold_279_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14062..15480
DNA (1419bp) protein (473aa)
MATE efflux family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXG1_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA49993.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
putative efflux protein, MATE family
sw_5_scaffold_279_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15636..17990
DNA (2355bp) protein (785aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3S3_HALJB
DEAD/DEAH box helicase domain-containing protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ADJ13414.1}; DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:ELY32754.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halob
sw_5_scaffold_279_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18090..18707
DNA (618bp) protein (206aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8N1_9EURY
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:EMA40964.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sodium:calcium antiporter
sw_5_scaffold_279_17
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19232..19897)
DNA (666bp) protein (222aa)
HAD-superfamily hydrolase id=24619741 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:ERH07154.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; H
haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED
sw_5_scaffold_279_18
unknown

Not on your lists

comp(19985..20461)
DNA (477bp) protein (159aa)

This feature has no annotations

sw_5_scaffold_279_19
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20507..21523
DNA (1017bp) protein (339aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=751944 species="Archaea;
endA; tRNA-splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease n=1 Tax=Halobacterium sp. DL1 RepID=G4IBE0_9EURY
Displaying 19 items

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