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sw_5_scaffold_283

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_283_1
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

275..649
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9Z9Q2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY83104.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
sw_5_scaffold_283_2
unknown

Not on your lists

comp(693..908)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_5_scaffold_283_3
unknown

Not on your lists

comp(1070..1804)
DNA (735bp) protein (245aa)

This feature has no annotations

sw_5_scaffold_283_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1863..2348
DNA (486bp) protein (162aa)
Gluconate dehydratase n=1 Tax=Halogranum salarium B-1 RepID=J2ZKQ2_9EURY
Gluconate dehydratase {ECO:0000313|EMBL:EJN61295.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
Mandelate racemase/muconate lactonizing protein
sw_5_scaffold_283_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2406..2798)
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA41539.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_5_scaffold_283_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2893..3831
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYS2_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01992.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_5_scaffold_283_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4559..6328)
DNA (1770bp) protein (590aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9D2_9EURY
sw_5_scaffold_283_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6645..8081)
DNA (1437bp) protein (479aa)
aldH2; aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde Dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M739_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA41218.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
sw_5_scaffold_283_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8314..9441)
DNA (1128bp) protein (376aa)
Transcriptional regulator, TrmB n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E9L7_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ELZ43094.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovoru
transcriptional regulator, TrmB
sw_5_scaffold_283_10
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10008..11408
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZKR5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61310.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_283_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11556..12644
DNA (1089bp) protein (363aa)
Xaa-Pro aminopeptidase M24 family protein (EC:3.4.-.-)
Peptidase M24 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQU4_9EURY
Peptidase M24 {ECO:0000313|EMBL:EFW93358.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;
sw_5_scaffold_283_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12730..13695)
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQE5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93209.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_283_13
Blastomyces dermatitidis, Blastomyces, Onygenales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

comp(13782..14168)
DNA (387bp) protein (129aa)
U3 small nucleolar RNA-associated protein 5 {ECO:0000313|EMBL:EGE79276.1}; TaxID=653446 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Aj
sw_5_scaffold_283_14
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14408..15502
DNA (1095bp) protein (365aa)
celM; cellulase, endo-1,3(4)-beta-glucanase, peptidase M42 family protein / endoglucanase (EC:3.2.1.4)
Cellulase M related protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y2L3_9ARCH
Cellulase M related protein {ECO:0000313|EMBL:ERH07812.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
sw_5_scaffold_283_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15735..16721
DNA (987bp) protein (329aa)
Oxidoreductase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYM7_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EMA50418.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
oxidoreductase domain-containing protein
sw_5_scaffold_283_16
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16892..17149
DNA (258bp) protein (86aa)
Like-Sm ribonucleoprotein core n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SRE5_NATMM
Sm ribonucleoprotein-like protein
Sm ribonucleoprotein-like protein {ECO:0000313|EMBL:ELY25306.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain
sw_5_scaffold_283_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17146..17316
DNA (171bp) protein (57aa)
50S ribosomal protein L37e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0L4_NATM8
rpl37e; 50S ribosomal protein L37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_5_scaffold_283_18
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17443..18951
DNA (1509bp) protein (503aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NR41_HALBP
sw_5_scaffold_283_19
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19292..19960)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AI78_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELY97078.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
sw_5_scaffold_283_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20065..21219
DNA (1155bp) protein (385aa)
Class I and II aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7E1_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EMA53473.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
class I and II aminotransferase
sw_5_scaffold_283_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21409..21786
DNA (378bp) protein (126aa)
Translation initiation factor 5A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LU04_9EURY
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
translation initiation factor IF-5A
sw_5_scaffold_283_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21883..22716
DNA (834bp) protein (278aa)
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0M5_9EURY
Agmatinase {ECO:0000313|EMBL:EMA50230.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
sw_5_scaffold_283_23
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23064..23831
DNA (768bp) protein (256aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=797303 species="Archaea;
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JFY5_NATP1
dinuclear metal center protein, YbgI/SA1388 family
sw_5_scaffold_283_24
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24296..24808
DNA (513bp) protein (171aa)
Rhodopsin n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E2A1_9EURY
Sensory rhodopsin-2 {ECO:0000313|EMBL:KKF39303.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
rhodopsin
sw_5_scaffold_283_25
unknown

Not on your lists

24757..25041
DNA (285bp) protein (95aa)

This feature has no annotations

sw_5_scaffold_283_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25167..26183
DNA (1017bp) protein (339aa)
Deoxyhypusine synthase {ECO:0000313|EMBL:ELZ24850.1}; EC=2.5.1.46 {ECO:0000313|EMBL:ELZ24850.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosim
deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNK6_9EURY
Displaying 26 items

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